Table 2. Virulence patterns (EC) distribution among Phylogenetic groups of UPEC and DEC E.coli isolates.
| Virulence pattern | Phylogenetic group | Isolates N (%) |
|||||||
|---|---|---|---|---|---|---|---|---|---|
| A0 | A1 | B1 | B2 2 | B2 3 | D1 | D2 | UPEC | DEC | |
| Ec1(UPEC/DEC) | 9 /5 | 8/16 | 1/- | 2/6 | 1/11 | 3/6 | - | 24 (23.3%) | 44 (62.9%) |
| Ec2 | 2 | 2 | - | 1 | 6 | 1 | - | 12(11.65%) | 0 |
| Ec3(UPEC/DEC) | 2/2 | 5/8 | 1 | -/2 | 1/2 | 2 | - | 11(10.67%) | 14 (20%) |
| Ec4(UPEC/DEC) | 5/2 | 3/2 | 1 | - | - | 1 | 1 | 11(10.67%) | 4 (5.71%) |
| Ec5 | 3 | 5 | - | - | - | 1 | - | 9 (8.7%) | 0 |
| Ec6 | - | 2 | - | 2 | 2 | - | - | 6 (5.8%) | 0 |
| Ec7 | - | 1 | 2 | 2 | - | - | - | 5 (4.85%) | 0 |
| Ec8 | - | 1 | - | - | - | 2 | - | 3 (2.91%) | 0 |
| Ec9 | - | - | 1 | - | - | 2 | - | 3 (2.91%) | 0 |
| Ec10(UPEC/DEC) | - | - | - | 1/2 | -/2 | -/2 | 2 | 3 (2.91%) | 6 (8.57%) |
| Ec11 | - | - | - | - | - | 1 | 1 | 2 (1.94%) | 0 |
| Ec12 | - | 1 | - | 1 | - | - | - | 2 (1.94%) | 0 |
| Ec13 | 2 | - | - | - | - | - | - | 2 (1.94%) | 0 |
| Ec14 | - | - | - | - | 2 | - | - | 2 (1.94%) | 0 |
| Ec15 | - | - | - | 2 | - | - | - | 2 (1.94%) | 0 |
| Ec16 | - | 2 | - | - | - | - | - | 2 (1.94%) | 0 |
| Ec17 | - | 1 | - | - | - | - | - | 1 (0.97%) | 0 |
| Ec18 | - | 1 | - | - | - | - | - | 1 (0.97%) | 0 |
| Ec19 | 1 | - | - | - | - | - | - | 1 (0.97%) | 0 |
| Ec20 | - | - | - | - | 1 | - | - | 11 (0.97%) | 0 |
| Ec21(UPEC/DEC) | - | - | - | -/2 | - | - | - | 0 | 2 (2.86%) |
| total(UPEC/DEC) | 24/9 | 32/26 | 6/- | 11/12 | 13/15 | 13/8 | 4/- | 103(100%) | 70(100%) |
UPEC, uropathogenic E.coli; DEC, Diarrheagenic E.coli; Ec1include (fimH gene); Ec2 (sfa gene); Ec3 (fimH and iroN genes); Ec4 (no genes detected); Ec5 (fimH and sfa); Ec6 (fimH, sfa, papE and iroN genes); Ec7 ((fimH, sfa and iroN genes); Ec8 (fimH and papA); Ec9 (papE); Ec10 (fimH, papA and iroN genes); Ec11 (sfa and iroN genes); Ec12 (fimH, sfa, papE); Ec13 (sfa, papA and iroN genes); Ec14 (sfa, papA, papE and iroN genes); Ec15 (fimH, sfa, papA, papE and iroN genes); Ec16 ((fimH, papE and iroN genes), Ec17 (papA); Ec18 (papE); Ec19 ((fimH, sfa, papA); Ec20 (fimH, sfa, iroN and hly); Ec21 (fimH, iroN and hly genes).