Table 4.
Conjunction FDR: Pleiotropic Loci in T2D and CARD (cFDR<0.05).
| RSID | ROLE | GENE | CHR | P.valueA | P.valueB | cFDR.AcB | cFDR.BcA | conjunction FDR |
|---|---|---|---|---|---|---|---|---|
| rs10965212 | ncRNA_intronic | CDKN2B-AS1 | chr9 | 0.004 | 1.37E-17 | 0.004 | 9.10E-15 | 0.004 |
| rs11211039 | Intergenic | LINC01343,RRAGC | chr1 | 2.00E-04 | 0.00012 | 0.0136 | 0.0086328 | 0.0136 |
| rs11979110 | Intergenic | KLF14,MIR29A | chr7 | 1.00E-07 | 0.002137 | 4.66E-05 | 0.014959 | 0.014959 |
| rs4510208 | Intronic | ICA1L | chr2 | 0.015 | 4.29E-11 | 0.015 | 4.97E-08 | 0.015 |
| rs10744777 | Intronic | ALDH2 | chr12 | 0.0041 | 1.52E-06 | 0.0205 | 0.00051908 | 0.0205 |
| rs3818717 | Exonic | RAI1 | chr17 | 0.0049 | 5.16E-06 | 0.021233 | 0.00142416 | 0.02123333 |
| rs13275988 | Intergenic | LOC101927798,LOC101927822 | chr8 | 0.00029 | 0.000647 | 0.02987 | 0.03136495 | 0.03136495 |
| rs4780476 | Intronic | CPPED1 | chr16 | 4.10E-05 | 0.001434 | 0.014514 | 0.0458912 | 0.0458912 |
| rs3843467 | Intronic | C5orf67 | chr5 | 2.50E-06 | 0.00705 | 0.001541 | 0.0493479 | 0.0493479 |
Notes:
P.valueA is the p value of T2D.
P.valueB is the p value of CARD.