2.
sRNA SpR19潜在靶向groEL的种子区序列与靶向位点的生物信息学预测结果
Seed sequences of sRNA SpR19 and their corresponding potential target sites in groEL mRNA and inter-genic regions predicted by bioinformatics analysis
| Binding site | |
| Site1 | |
| sRNA SpR19 | 95: 5' auaAAUGAAGUAAUAAauu 3' |
| GroEL | 2908: 3' cuaUUGUUUUAUUAUUguu 5' |
| Site2 | |
| sRNA SpR19 | 107: 5' aUAAAUUAGGGUGGa 3' |
| GroEL | 315: 3' cAUUUAGUUUUGCUg 5' |
| Site3 | |
| sRNA SpR19 | 111: 5' auuAGGGUGGAACCGCguu 3' |
| GroEL | 681: 3' cguUCCUGCCCCGGUGguu 5' |
| Site4 | |
| sRNA SpR19 | 26: 5' gugUAAGUCAGGUGaaa 3' |
| GroEL | 2290: 3' acaAUUUAGUUCACgac 5' |
| Site5 | 108: 5' uaaAUUAGGGUGGAa 3' |
| sRNA SpR19 | 281: 3' uugUAAUUUCAUUUg 5' |
| GroEL | |
| Site6 | |
| sRNA SpR19 | 47: 5' auaAAGGACUGGCAcuu 3' |
| GroEL | 396: 3' uggUUUCUGAUUGUauc 5' |
| Site7 | |
| sRNA SpR19 | 1: 5' GCGUUUCUGCA 3' |
| GroEL | 819: 3' CGCAAGGAUGU 5' |