Skip to main content
. Author manuscript; available in PMC: 2020 Jul 25.
Published in final edited form as: Mol Cell. 2019 Jun 18;75(2):357–371.e7. doi: 10.1016/j.molcel.2019.05.019

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit polyclonal anti-ChREBP Novus Biologicals NB400135 lots Q1-Q3
Rabbit polyclonal anti-HCF-1 Bethyl laboratories A301-400A
Rabbit monoclonal anti-OGT Cell Signaling 24083
Rabbit monoclonal anti-PHF2 Cell Signaling 3497S
Rabbit polyclonal anti-GCK Santa Cruz sc7908
Rabbit monoclonal anti-BAD Abcam ab32445
Rabbit polyclonal anti-phospho BAD (S155) Cell Signaling 9297
Mouse monoclonal anti-Actin Sigma-Aldrich A5316
Rabbit IgG Isotype Control Invitrogen 31235
Mouse monoclonal anti FLAG M2- Peroxidase Sigma-Aldrich A8592
Mouse Anti-rabbit IgG (Conformation Specific) Cell Signaling 5127S
Goat anti-rabbit IgG HRP Jackson ImmunoResearch Laboratories 111-035-003
Goat anti-mouse IgG HRP Jackson ImmunoResearch Laboratories 115-035-003
Bacterial and Virus Strains
BAD SD Adenovirus Gimenez-Cassina et al, 2014 PMID: 24506868
BAD AAA Adenovirus Gimenez-Cassina et al, 2014 PMID: 24506868
Gk shRNA Adenovirus Gift of Dr. Christopher Newgard (Duke University) Bain et al., 2004 PMID: 15331526
Bad shRNA Adenovirus Gimenez-Cassina et al, 2014 PMID: 24506868
Chrebp shRNA Adenovirus Designed from sequence in Dentin et al, 2006 PMID: 16873678
Ctrl shRNA Adenovirus Gimenez-Cassina et al, 2014 PMID: 24506868
FLAG-ChREBP Adenovirus Gift from Dr. Donald Scott (Mount Sinai) (Metukuri et al, 2012) PMID: 22586588
Biological Samples
Human Liver Tissues Healthy and NASH Patients Liver Tissue Cell Distribution System, Minneapolis, Minnesota NIH Contract # HHSN276201200017C
Chemicals, Peptides, and Recombinant Proteins
Phosphatase Inhibitor Cocktail 2 aqueous solution Sigma-Aldrich P5726
Protein Phosphatase Inhibitor Cocktail 3 Sigma-Aldrich P0044
Phosstop, Phosphatase Inhibitor Sigma-Aldrich 4906837001
Complete™, EDTA-free Protease Inhibitor Cocktail Sigma-Aldrich 11873580001
PuGNAC Sigma-Aldrich A7229
Thiamet G Sigma-Aldrich SML 0244
Sodium Orthovanadate Sigma-Aldrich S6508
Western Lightning Plus-ECL Thermo Fisher Scientific 509049325
SuperSignal West Femto Thermo Fisher Scientific PI34095
NuPAGE LDS Sample Buffer (4X) Life Technologies NP0008
FLAG Peptide Sigma-Aldrich F3290
UDP-GlcNAC Sigma-Aldrich
N-Acetyl-D-glucosamine Sigma-Aldrich A8625-5G
Proteinase K Life technologies 25530015
CHELEX 100 200-400 MB Bio-Rad Laboratories 1421253
Formaldehyde (37% solution) Santa Cruz sc-203049
Collagenase Sigma-Aldrich C5138
Insulin Sigma-Aldrich I6634
Dexamethasone Sigma-Aldrich D-2915
Percoll Sigma-Aldrich P4937
MG132 Sigma-Aldrich C2211
BSA Fraction IV Fatty acid free Fischer Scientific NC9227912
Glucosamine hydrochloride Sigma-Aldrich G4875
Ammonium Formate Sigma-Aldrich 17843
Acetonitrile Sigma-Aldrich AX0145-1
HPLC grade water Sigma-Aldrich WX0008
Ammonium Acetate Sigma-Aldrich 5330040050
U14C labeled glucose American Radiolabled Chemical ARC-122
Critical Commercial Assays
Dual luciferase reagent Promega E1910
Targefect hepatocyte Targeting systems HEP-01
Trizol Life Technologies 15596026
Syber Green Master Mix Life Technologies
Superscript III 1st Strand Synthesis Life Technologies 18080051
Lipofectamine RNAiMax Life Technologies 13778150
Q5 Site-Directed Mutagenesis Kit New England Biolabs E0554S
Gateway™ LR Clonase™ II Enzyme mix Thermo Fischer Scientific 11791100
TnT® Coupled Wheat Germ Extract System Promega L4130
Deposited Data
Unprocessed gel images presented in this manuscript http://dx.doi.org/10.17632/by6b3tn4g2.1
Experimental Models: Cell Lines
HEK293T Cells ATCC CRL-3216
Experimental Models: Organisms/Strains
C57BL/6: WT
C57BL/6-KO (BAD) Gimenez-cassina et al, 2014 PMID: 24506868
GKlox/lox Gift from Dr. Mark Magnuson (Vanderbilt university): Postic et al, 1999 PMID: 9867845
C57BL/6-alb-cre mice Jackson Laboratory 003574
Oligonucleotides
Ctrl siRNA: siGenome Non-targeting siRNA #1 Dharmacon D-001210
Hcf1 siRNA-1 sense sequence: GGA GCU UAU AGU GGU GUU U Dharmacon N/A
Hcf1 siRNA-2 sense sequence: AGA ACA ACA UUC CGA GGU A Dharmacon N/A
Primers for qPCR: See Table S1 for sequence IDT N/A
Recombinant DNA
L-Pk ChORE firefly luciferase reporter Gift from Dr. Howard Towle: Lou D-Q et al, 1999 PMID: 10497199
Acc ChORE firefly luciferase reporter Gift from Dr. Howard Towle: O’Callaghan BL et al, 2001 PMID: 11340083
pCMV-Green Renilla Luciferase control plasmid: Thermo Fisher Scientific PI16153
pCMV10 3X FLAG-ChREBP Gift from Dr. Mark Herman (Duke University) N/A
pCMV-SPORT6 HCF-1 Plasmid Harvard PlasmID MmCD00320375
His-OGT WT Janetzko et al, 2016 PMID: 27618188
His-OGT D554N Janetzko et al, 2016 PMID: 27618188
OGT WT This Paper N/A
OGT D554N This Paper N/A
PCDNA3.1 FLAG-PGC1α Gift from Dr. Pere Puigserver: Fan et al, 2004 PMID: 14744933
pCDNA3.1 Invitrogen V790-20
Software and Algorithms
ImageJ https://imagej.nih.gov/ij/ N/A
Prism Graph Pad N/A
SDS 2.4 (for Q-PCR) Applied Biosystems N/A
MassHunter Quant Agilent Technologies N/A
Sequest Thermo Fischer Scientific N/A
Other
Serum Gemini 100-106 lot A16E00E
High Carbohydrate Diet (70% sucrose) Envigo TD.150694
WGA Beads Vector Laboratories AL-1023
Anti-FLAG® M2 Magnetic Beads Sigma-Aldrich M8823
Protein G Agarose Sigma-Aldrich Aldrich 11719416001
DynaBeads Protein A Thermo Fisher Scientific 10001D
Amicon Ultra Centrifugal Filters Millipore UFC500324