Table 3:
Logistic Regression – Backward Stepwise | Logistic Regression – Forward Stepwise | Random Forest | |
---|---|---|---|
Development Set (Case block 1 vs. Control block 1) | |||
AUC | 0.769 | 0.774 | 0.738 |
Validation Set (Case block 1 vs. Control block 1) | |||
AUC | 0.842 | 0.849 | 0.829 |
Sensitivity, FPR 2.5% | 21.1% | 15.8% | 36.8% |
Sensitivity, FPR 5.0% | 42.1% | 42.1% | 57.9% |
Sensitivity, FPR 10.0% | 52.6% | 52.6% | 63.2% |
Validation Set Performance at Selected Thresholda | |||
Sensitivity | 47.4% | 47.4% | 63.2% |
Specificity | 93.9% | 93.2 % | 94.6% |
Testb – All Case Block 1 vs. Case Block 2 | |||
AUC | 0.753 | 0.749 | 0.954 |
Sensitivity | 39.5% | 41.8% | 91.2% |
Specificity | 89.4% | 89.4% | 83.5% |
Testb – Validation Set Case Block 1 vs. Control Block 2 | |||
AUC | 0.849 | 0.852 | 0.840 |
Sensitivity | 42.1% | 47.3% | 63.2% |
Specificity | 94.6% | 94.5% | 93.8% |
Testb – Case Block 2 vs. Validation Set Control Block 1 | |||
AUC | 0.524 | 0.536 | 0.584 |
Sensitivity | 10.6% | 10.6% | 16.5% |
Specificity | 93.9% | 93.2% | 94.6% |
Testb – Case block 2 vs. Control block 2 | |||
AUC | 0.532 | 0.543 | 0.600 |
Sensitivity | 10.6% | 10.6% | 16.5% |
Specificity | 94.6% | 94.5% | 93.8% |
Abbreviations: AUC – area under the curve, FPR – false positive rate
Threshold selected for FPR on validation set approximately 5 %
All sensitivity and specificities are reported at the selected threshold