Table 2.
Gene | SNP | Location | Mutation | Effect | Frequency a | Functional Effect | ||
---|---|---|---|---|---|---|---|---|
European | African | Asian | ||||||
CYP4A11 | rs1126742 | Exon | A > G | Phe330Ser | 0.15 | 0.36 | 0.25 | It was associated with hypertension in white individuals, most probably through decreased production of 20-HETE in the kidney [137]. |
CYP4F2 | rs2108622 | Exon | C > T | Val433Met | 0.27 | 0.06 | 0.26 | It reduced the metabolism of vitamin K. Therefore, patients carrying this genetic variant needed a higher dose of warfarin, in order to keep the targeted anticoagulant effect [149,150,151]. |
CYP4F3 | rs4646904 | Exon | A > G | Val358Val | 0.65 | 0.35 | 0.34 | It was associated with lung cancer, especially in smokers [30] and ulcerative colitis [158]. |
CYP4F11 | rs200033002 | Exon | C > T | Asp315Asn | 0 | 0 | 0.01 | It decreased the metabolism of erythromycin and arachidonic acid compared to the wild type in vitro [37]. |
CYP4B1 | rs3215983 | Frameshift variant | AT881–882del | Produces premature stop codon | 0.15 | ND | 0.33 | It was reported to increase the risk of bladder cancer, because it has lower capacity to metabolize the carcinogenic compounds [27]. |
CYP4V2 | rs13146272 | Exon | C > A | Gln259Lys | 0.36 | 0.4 | 0.6 | It was associated with the risk of deep venous thrombosis and tamoxifen-induced venous thrombosis [162,163,164,165]. |
CYP4V2 | rs199476197 | Exon | A > C | His331Pro | 0 | 0 | 0.0004 | It decreased CYP4V2 protein expression and activity toward fatty acid metabolism. Therefore, this genetic variant may cause accumulation of fatty acids in the retina [19,166]. |
CYP4V2 | IVS6-8del17insGC | Intron 6, exon 7 | Insertion/deletion | Exon7 del | ND | ND | ND | It causes deletion of exon 7 in the CYP4V2 protein, resulting in a complete loss of CYP4V2 activity. It is the most common mutations in BCD patients [52,99]. |
a Data regarding the frequency of genetic variants among different ethnic groups were obtained from Ensemble database. ND, not determined. BCD, Bietti’s crystalline dystrophy.