| CCA | Cholangiocarcinoma |
| iCCA | Intrahepatic cholangiocarcinoma |
| eCCA | Extra-hepatic cholangiocarcinoma |
| pCCA | Perihilar cholangiocarcinoma |
| CSC | Cancer stem cell |
| TME | Tumor microenvironment |
| EMT | Epithelial-to-mesenchymal transition |
| HCC | Hepatocellular carcinoma |
| LCSGJ | Liver Cancer Study Group of Japan |
| MF-iCCA | Mass forming intrahepatic cholangiocarcinoma |
| PI-iCCA | Periductal–infiltrating intrahepatic cholangiocarcinoma |
| IG-iCCA | Intraductal–growing intrahepatic cholangiocarcinoma |
| DDR | DNA damage response |
| TGF-β | Transforming growth factor-β |
| HSA | Heat-stable antigen |
| MMP-7 | Matrix metalloproteinase-7 |
| CXCR4 | CXC chemokine receptor 4 |
| ERK | Extracellular signal-regulated kinase |
| ROS | Reactive oxygen species |
| CD44v9 | CD44 variant 9 |
| OV-CCA | Opisthorchis viverrini-related cholangiocarcinoma |
| S100P | S100 calcium-binding protein P |
| CX-2 | Cyclooxygenase-2 |
| EpCAM | Epithelial cell adhesion molecule |
| TaMP | Tumor-associated microparticle |
| SOX2 | Sex determining region ϒ-box 2 |
| OS | Overall survival |
| SCF | Stem cell factor |
| SALL4 | Sal-like protein 4 |
| CLC | Cholangiolocellular carcinoma |
| EMMPRIN | Extracellular matrix metalloproteinase inducer |
| Sca-1 | Stem cell antigen 1 |
| EGF | Epidermal growth factor |
| CAF | Cancer-associated fibroblasts |
| TAM | Tumor-associated macrophages |
| ECM | Extracellular matrix |
| PGE2 | Prostaglandin E2 |
| IL | Interleukin |
| VEGF-A | Vascular endothelial growth factor-A |
| TNF-α | Tumor necrosis factor-α |
| EVs | Extracellular vesicles |
| PDGF | Platelet-derived growth factor |
| FAK | Focal adhesion kinase |
| SCID | Severe combined immunodeficiency |
| xCT | Cysteine–glutamate transporter |
| CTLA4 | Cytotoxic Tlymphocyteassociated antigen 4 |
| PD-L1 | Programmed death ligand 1 |
| PD-1 | Programmed death 1 |
| TRS | Tumor reactive stroma |
| MCP | Monocyte chemoattractant protein |
| SDF | Stromal derived factor |
| Treg | T leukocyte immunosuppressive regulators |
| MNZ | Metronidazole |
| GEM | Gemcitabine |
| ALDH | Aldehyde dehydrogenase |
| FGF | Fbroblast growth factor |
| NO | nitric oxide |
| HGF | hepatocyte growth factor |
| HB-EGF | heparin-binding epidermal growth factor |
| FOX P3 | Forkhead box P3 |
| SCID | severe combined immunedeficiency |
| ENT1 | equilibrative nucleoside transporter 1 |
| RRM1 | ribonucleotide reductase M1 |