Table 2. Summary of read pairs used and prediction results using consensus database.
Method | Metaphlan-II | Clark-S | Kraken |
---|---|---|---|
No. of raw read pairs | 200 M | 200 M | 200 M |
No. of classified read pairs | 5 M | 6 M | 8 M |
No. of phylum | 4 | 19 | 18 |
No. of genus | 19 | 188 | 198 |
No. of species | 26 | 498 | 514 |