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. Author manuscript; available in PMC: 2021 Mar 1.
Published in final edited form as: Schizophr Res. 2019 Mar 18;217:17–25. doi: 10.1016/j.schres.2019.03.007

Table 1.

Hi-C data in human brain identify schizophrenia (SCZ) risk genes. NPC, neural progenitor cells; hiPSC, human induced pluripotent stem cells; res, resolution. Only the number of protein-coding genes was reported except (Giusti-Rodriguez and Sullivan, 2018).

SCZ risk genes defined by Hi-C Hi-C data obtained from res SCZ GWAS
CP: 314 / GZ: 310 (Won et al., 2012) Two cortical laminae of the developing cortex: CP, cortical plates; GZ, germinal zone. 10kb (Schizophrenia Working Group of the Psychiatric Genomics Consortium et al., 2014)
CP: 285 / GZ: 293 (Pardinas et al., 2018) (Pardinas et al., 2018)
Adult brain: 414 (Wang et al., 2018) Adult dorsolateral prefrontal cortex. 10kb
NPC: 345 / Neuron: 331 / Glia: 170 (Rajarajan et al., 2018) hiPSC-derived NPC, Neurons, Glia. 10kb
Adult brain: 1,038 (GiustiRodriguez and Sullivan, 2018) Fetal cortex, Adult anterior temporal cortex. 10kb