Table 2.
Genome-Wide Significant and Suggestive Association results
| Phenotype | Chr | Band | Base Pair | SNP marker | Allele | Beta | P | Gene |
|---|---|---|---|---|---|---|---|---|
| Temporal Horn of Lateral Ventricle | 2 | p16.3 | 50,368,229 | rs12467877 | T | 184.9 | 6.76E–10 | NRXN1 |
| Temporal Horn of Lateral Ventricle | 3 | q26.31 | 172,659,246 | rs10440041 | G | 246.6 | 9.65E–09 | SPATA16 |
| Temporal Horn of Lateral Ventricle | 4 | q32.1 | 156,265,336 | rs75174989 | G | 258.1 | 3.20E–08 | MAP9 |
| Temporal Horn of Lateral Ventricle | 16 | p12.1 | 27,890,361 | chr16:27890361:I | TG | 232.2 | 3.63E–08 | GSG1L |
| Precentral | 1 | p36.32 | 5,337,271 | rs61759358 | A | −718.5 | 2.91E–08 | intergenic |
| Pallidum | 16 | q23.2 | 80,215,561 | rs9935652 | G | 109.6 | 4.08E–08 | intergenic |
| Lateral Ventricle | 3 | p12.3 | 77,856,623 | rs3852018 | C | 6836 | 4.22E–08 | intergenic |
| Cortex | 3 | q21.3 | 128,650,296 | chr3:128650296:I | GTA | 11710 | 4.43E–08 | KIAA1257 |
| Isthmus Cingulate | 22 | q13.2 | 42,398,849 | rs133310 | C | −179.6 | 5.17E–08 | WBP2NL |
GWAS results that passed the suggestive significance threshold (P < 5.5E–08). Bold font: significant after multiple test correction (P < 2.04E–09).