FIG 1.

(A) Violin plots reporting the relative abundances of differentially abundant bacterial phyla among healthy, adenoma, and carcinoma groups from metagenomic data analysis. P values were computed using the Wilcoxon rank sum test and adjusted using the Benjamini-Hochberg method. **, adjusted P value < 0.01; *, adjusted P value < 0.05. (B) Violin plots reporting the relative abundances of E. coli from metagenomic data analysis. P values were computed using the Wilcoxon rank sum test and adjusted using the Benjamini-Hochberg method. **, adjusted P value < 0.01. (C) Stacked bar plot reporting the fraction of sRNA-Seq reads assigned to hsa-miRNAs or hsa-sncRNAs (blue), human genome (green), or bsRNAs (orange) or that were not mapped (red). (D) Violin plots reporting the expression levels for the most significant differentially expressed hsa-miRNA (left) and hsa-sncRNA (right) between the healthy and carcinoma groups (DESeq2 adjusted P value < 0.05).