REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Mouse anti-PCNA monoclonal antibody | Sigma | P8825; RRID: AB_477413 |
Rabbit anti-PCNA polyclonal antibody | Abcam | 18197; RRID: AB_444313 |
Rabbit anti-GFP polyclonal antiserum | Torrey Pines Biolabs | TP401; RRID: AB_10013661 |
Mouse anti-β-catenin antibody | BD Bioscience | 610153; RRID: AB_397554 |
Rabbit anti-dot1l polyclonal antibody | Bethyl labs | A300-954A; RRID: AB_2261948 |
Donkey anti-mouse AF488 | Jackson Immuno | 715-545-150 |
Donkey anti-mouse AF647 | Jackson Immuno | 715-605-150 |
Donkey anti-mouse Cy-3 | Jackson Immuno | 715-165-150 |
Donkey anti-rabbit Cy3 | Jackson Immuno | 711-165-152 |
Donkey anti-rabbit AF488 | Jackson Immuno | 711-545-152 |
Rabbit anti-KMT4/Dot1l polyclonal antibody | Abcam | Ab228766 |
Rabbit anti-alpha tubulin antibody | Abcam | Ab15246; RRID: AB_301787 |
Anti-rabbit HRP-conjugated antibody | Cell Signaling Technologies | 7074S;RRID: AB_2099233 |
Chemicals, Peptides, and Recombinant Proteins | ||
Leibovitz L-15 media | ThermoFisher | 21083-027 |
Hyaluronidase | Sigma-Aldrich | H3884 |
Papain dissociation kit | Worthington Biochemical Corp | LK003178 |
DNase I | NEB | M0303S |
Leupeptin trifluoroacetate salt | Sigma-Aldrich | L2023-10MG |
GSK-3β Inhibitor I | Calbiochem | 361540 |
Tankyrase inhibitor/axin stabilizing agen XAV939 | Cayman chemical | 13596 |
Dot1 inhibitor EPZ004777 | Calbiochem | 532282 |
TO-PRO-3 Iodide | Invitrogen | T3605 |
Vectashield | Vector Labs | H-1000 |
Critical Commercial Assays | ||
TRIzol-LS | ThermoFisher | 10296028 |
Taqman probe: U6 snRNA | Life Technologies | 001973 |
Taqman probe: hsa-miR-216a | Life Technologies | 002220 |
TURBO DNAfree kit | ThermoFisher | AM1907 |
Maxima first strand cDNA synthesis kit | Thermo Scientific | K1641 |
SsoAdvanced Universal SYBR® Green Supermix | Bio-Rad | 1725271 |
QuikChange Lightning Site-Directed Mutagenesis Kit | Stratagene | 210518 |
mMESSAGE mMACHINE® SP6 Transcription Kit | Life Technologies | AM1340 |
NucAway™ Spin Columns | Life Technologies | AM10070 |
Experimental Models: Organisms/Strains | ||
Zebrafish: Wild-type (AB) | Walker, 1999 | N/A |
Zebrafish: Tg(1016tuba1a:gfp) | Fausett and Goldman, 2006 | N/A |
Zebrafish: Tg(gfap:gfp)mi2001 | Bernardos and Raymond, 2006 | N/A |
Oligonucleotides | ||
See Table S1 for oligonucleotides used. | N/A | N/A |
Recombinant DNA | ||
PCS2+ vector | Turner and Weintraub, 1994 | N/A |
Software and Algorithms | ||
ImageJ software 4.13 | Schneider et al., 2012 | https://imagej.nih.gov/ij/ |
GraphPad Prism 7 | GraphPad | https://www.graphpad.com/scientific-software/prism/ |