Table 1. Data collection, Processing and Model refinement parameters.
Parameter | Value |
---|---|
Data collection | |
Voltage (kV) | 300 |
Magnification (x) | 130000 |
Å/pix | 1.06 |
Energy Filter with Slit (eV) | 20 |
Frames per Micrograph | 40 |
Total Dose (e- /Å2) | 40 |
Micrographs | 3220 |
Defocus Range (μm) | 0.8–2.6 |
Data Processing | |
Micrographs | 3200 |
Frames used | 4–40 |
Å/pix | 1.06 |
Particles (Total) | 46348 (56275) |
Symmetry Applied | I4 |
Overall Resolution@FSC0.143 (Å) | 2.75* |
B-factor (Å2) | −104.93* |
Model Refinement | |
Composition | |
Chains | 19 |
Atoms | 41731 (Hydrogens: 0) |
Refinement | |
CCmask | 0.7961 |
CCvolume | 0.7941 |
ADP (B-factors) | |
Iso/Aniso | 41731/0 |
Mean | 101.95 |
RMS deviations | |
Bonds (Å) | 0.006 |
Angles (O) | 0.806 |
EMRinger Score | 5.40 |
MolProbity validation | |
Clash score, all atoms | 3.35 |
MolProbity score | 1.57 |
Rotamer Outliers (%) | 0.16 |
Ramachandran | |
Favoured (%) | 93.04 |
Allowed (%) | 6.83 |
Outliers (%) | 0.13 |
* Calculated by RELION.