Table 2.
Key genes of ATCC33591 down-regulated by GA and NGA.
| Gene ID | Gene name | Description | Log2 flod change (GA) | Log2 flod change (NGA) |
|---|---|---|---|---|
| SAV0023 | None | 5’-nucleotidase | –2.13 | –2.16 |
| SAV0095 | plc | 1-phosphatidylinositol phosphodiesterase | –2.67 | –3.49 |
| SAV0104 | None | Na/Pi cotransporter | –2.28 | –2.38 |
| SAV0191 | None | N-acetylmuramic acid-6-phosphate etherase | –2.9 | –3.42 |
| SAV0192 | None | PTS system EIIBC component | –2.5 | –2.82 |
| SAV0193 | None | RpiR family transcriptional regulator | –2.25 | –2.56 |
| SAV0216 | None | arabinogalactan ABC transporter permease | –1.91 | –2.17 |
| SAV0217 | None | oxidoreductase | –1.86 | –2.39 |
| SAV0218 | None | NADH-dependent dehydrogenase | –1.86 | –2.34 |
| SAV0219 | None | xylose isomerase | –1.58 | –2.16 |
| SAV0222 | uhpT | antiporter [Staphylococcus sugar phosphate antiporter | –1.68 | –2.16 |
| SAV0259 | scdA | Iron-sulfur cluster repair protein ScdA | –1.81 | –2.05 |
| SAV0261 | lytR | LytR family transcriptional regulator | –1.91 | –2.18 |
| SAV0285 | None | type VII secretion protein EsaB | –2.56 | –2.51 |
| SAV0315 | nanA | N-acetylneuraminate lyase | –1.75 | –2.25 |
| SAV0320 | geh | lipase | –2.81 | –3.84 |
| SAV0432 | hsdS | restriction endonuclease subunit S | –1.98 | –2.32 |
| SAV0450 | None | cobalamin synthesis protein CobW | –2.26 | –2.82 |
| SAV0458 | None | sodium-dependent transporter | –1.31 | –2.13 |
| SAV0465 | None | peptidase M23B | –3.07 | –2.63 |
| SAV0539 | rplJ | 50S ribosomal protein L10 | –1.39 | –2 |
| SAV0631 | None | manganese ABC transporter substrate-binding protein | –2.14 | –2.16 |
| SAV0632 | None | membrane protein ABC transporter permease | –1.96 | –2.14 |
| SAV0633 | None | phosphonate ABC transporter ATP-binding protein | –1.9 | –2.09 |
| SAV0705 | saeS | histidine protein kinase | –2.9 | –3.41 |
| SAV0706 | saeR | response regulator saeR | –1.82 | –3.25 |
| SAV0815 | nuc | nuclease | –2.47 | –3.07 |
| SAV1052 | truncated-atl | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase | –2.72 | –2.29 |
| SAV1131 | None | heme transporter IsdC | –1.58 | –2.1 |
| SAV1135 | None | sortase B | –3.56 | –2.71 |
| SAV1136 | None | heme-degrading monooxygenase IsdG, partial | –2.59 | –3.96 |
| SAV1155 | None | fibrinogen-binding protein | –1.98 | –3.14 |
| SAV1158 | None | fibrinogen-binding protein | –2.46 | –2.85 |
| SAV1159 | None | fibrinogen-binding protein | –1.82 | –2.12 |
| SAV1163 | None | alpha-hemolysin | –2.79 | –4.02 |
| SAV1169 | argF | ornithine carbamoyltransferase | –1.85 | –2.08 |
| SAV1436 | None | quinolone resistance protein NorB | –1.66 | –2.05 |
| SAV1437 | None | amino acid permease | –1.62 | –2.49 |
| SAV1550 | None | 5-formyltetrahydrofolate cyclo-ligase | –2.09 | –2.15 |
| SAV1660 | truncated-radC | hypothetical protein | –2.2 | –2.6 |
| SAV1661 | None | type III leader peptidase | –1.84 | –2.1 |
| SAV1686 | None | NrdR family transcriptional regulator | –1.79 | –2.02 |
| SAV1709 | ald | alanine dehydrogenase | –1.72 | –2.01 |
| SAV1799 | None | calcium-binding protein | –1.95 | –2.27 |
| SAV1809 | splF | serine protease | –2.6 | –4.04 |
| SAV1810 | splD | serine protease | –2.63 | –4.02 |
| SAV1811 | splC | serine protease | –2.59 | –3.87 |
| SAV1812 | splB | serine protease | –2.72 | –4.2 |
| SAV1813 | splA | serine protease | –2.64 | –4.18 |
| SAV1819 | lukD | gamma-hemolysin subunit B | –2.32 | –3.44 |
| SAV1820 | lukE | gamma-hemolysin subunit A | –2.41 | –3.05 |
| SAV1909 | None | cysteine protease | –2.21 | –2.33 |
| SAV1910 | None | staphostatin A | –2.4 | –2.05 |
| SAV1914 | None | Nitric-oxide synthase | –2.11 | –2.18 |
| SAV1937 | None | extracellular adherence protein Eap/Map | –1.57 | –2.48 |
| SAV1938 | None | protein map | –1.74 | –2.24 |
| SAV1942 | None | inhibitor | –2.02 | –3.32 |
| SAV2004 | None | gamma-hemolysin subunit B | –2.11 | –3.37 |
| SAV2005 | None | succinyl-diaminopimelate desuccinylase | –1.64 | –3.21 |
| SAV2035 | hld | delta-hemolysin | –1.87 | –2.24 |
| SAV2038 | agrC | histidine kinase | –1.94 | –2.09 |
| SAV2039 | agrA | histidine kinase | –2.09 | –2.34 |
| SAV2117 | None | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | –2.18 | –2.11 |
| SAV2119 | tdk | thymidine kinase | –.94 | –2.28 |
| SAV2177 | None | iron citrate ABC transporter substrate-binding protein | –2.09 | –2.09 |
| SAV2304 | None | secretory antigen SsaA, partial | –3.37 | –2.98 |
| SAV2363 | None | LytTR family transcriptional regulator | –1.94 | –2.03 |
| SAV2418 | sbi | hypothetical protein | –2.04 | –4.03 |
| SAV2419 | hlgA | gamma-hemolysin subunit A | –1.44 | –3.81 |
| SAV2420 | hlgC | Gamma-hemolysin C subunit HlgC | –1.12 | –3.55 |
| SAV2421 | hlgB | gamma-hemolysin subunit B | –1.24 | –3.45 |
| SAV2463 | None | peptide ABC transporter ATP-binding protein | –2.21 | –2.53 |
| SAV2464 | None | peptide ABC transporter ATP-binding protein | –2.68 | –2.45 |
| SAV2465 | None | peptide ABC transporter permease | –1.99 | –2.01 |
| SAV2470 | None | diaminopimelate epimerase | –1.55 | –2.04 |
| SAV2514 | None | Probable transport protein | –2.05 | –2.1 |
| SAV2544 | None | peptidase M23B | –2.89 | –2.41 |
| SAV2569 | isaA | transglycosylase | –2.68 | –2.39 |
| SAV2632 | arcC | carbamate kinase | –1.83 | –2.18 |
| SAV2634 | arcB | ornithine carbamoyltransferase | –1.71 | –2.15 |
| SAV2662 | None | capsular polysaccharide biosynthesis protein Cap8C | –2.9 | –2.76 |
| SAV2663 | None | capsular polysaccharide biosynthesis protein Cap5B | –2.58 | –2.69 |