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. 2019 Sep 20;9:13616. doi: 10.1038/s41598-019-49897-1

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Alpha diversity on rarefied fecal samples from pigs (AFR, COM and SPF) and warthogs (AFR and SPA). Alpha diversity was compared between groups by measuring the Shannon-Wiener’s metrics (A). Species richness was computed through Chao1 index (B). Shannon-Wiener’s metrics were also calculated for African animals grouped together (AFR pigs and AFR warthogs) against European animals (SPA warthogs, COM and SPF pigs (C). Dotted lines represent the standard deviation Outliers are indicated with plus signs on the plot.