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. Author manuscript; available in PMC: 2019 Sep 21.
Published in final edited form as: Curr Protoc Bioinformatics. 2018 Jun 5;62(1):e51. doi: 10.1002/cpbi.51

Figure 12.5.12.

Figure 12.5.12.

R-scape secondary structure visualisations for the SAM riboswitch (RF00162) shown in the Secondary structure tab. Two structures are shown: On the left, the R-scape analysis of the current secondary structure in the Rfam Seed alignment. On the right, an R-scape optimised structure predicted using the statistically significant covarying basepairs as folding constraints.