Table I.

Drug resistance-related differentially expressed non-coding RNAs.

Group	ID	Symbol	logFC	AveExpr	P-value	Change	Gene name
HCT116-OxPt	285735	LINC00326	1.46	7.31	2.1×10−05	UP	Long intergenic non-protein coding RNA 326
	284739	LINC00176	1.11	8.93	1.3×10−02	UP	Long intergenic non-protein coding RNA 176
HT29-OxPt	283460	HNF1A-AS1	−1.72	7.65	5.0×10−05	DOWN	HNF1A antisense RNA 1
	643911	CRNDEa	−1.97	10.82	1.4×10−06	DOWN	Colorectal neoplasia differentially expressed
LoVo-OxPt	283120	H19a	1.00	7.06	5.4×10−04	UP	H19, imprinted maternally expressed transcript
	64150	DIO3OS	−1.79	8.51	2.5×10−06	DOWN	DIO3 opposite strand/antisense RNA
	196047	EMX2OS	−1.46	7.87	2.5×10−03	DOWN	EMX2 opposite strand/antisense RNA
HCT116-SN38	652995	UCA1a	−1.40	12.29	4.4×10−06	DOWN	Urothelial cancer associated 1
HT29-SN38	441951	ZNFX1-AS1	1.35	10.22	9.2×10−05	UP	ZNFX1 antisense RNA 1
	727701	LINC00165	−1.03	7.43	5.5×10−05	DOWN	Long intergenic non-protein coding RNA 165
	100169750	PRINS	−1.50	9.81	6.8×10−06	DOWN	Psoriasis associated RNA induced by stress
	283460	HNF1A-AS1	−1.62	7.70	6.6×10−05	DOWN	HNF1A antisense RNA 1
	554202	MIR31HG	−1.49	8.07	1.3×10−05	DOWN	MIR31 host gene
	283131	NEAT1	1.32	11.22	9.3×10−04	UP	Nuclear paraspeckle assembly transcript 1
	100289410	MCF2L-AS1	−1.30	9.95	2.8×10−06	DOWN	MCF2L antisense RNA 1
	643911	CRNDEa	−1.17	11.21	2.9×10−05	DOWN	Colorectal neoplasia differentially expressed
LoVo-SN38	100093630	SNHG8	−1.49	9.80	1.3×10−03	DOWN	Small nucleolar RNA host gene 8
	253264	ZNF503-AS1	−2.28	7.90	8.6×10−07	DOWN	ZNF503 antisense RNA 1
	60674	GAS5	−1.21	15.21	2.1×10−02	DOWN	Growth arrest-specific 5
	64150	DIO3OS	1.07	9.94	4.0×10−05	UP	DIO3 opposite strand/antisense RNA
	196047	EMX2OS	−1.10	8.05	8.5×10−03	DOWN	EMX2 opposite strand/antisense RNA
	128439	SNHG11	−1.39	10.12	4.7×10−04	DOWN	Small nucleolar RNA host gene 11
	100124700	HOTAIRa	1.58	7.21	3.1×10−06	UP	HOX transcript antisense RNA
	114915	EPB41L4A-AS1	−1.42	15.27	3.0×10−02	DOWN	EPB41L4A antisense RNA 1
	652995	UCA1a	−1.45	7.58	1.6×10−04	DOWN	Urothelial cancer associated 1
	401237	LINC00340	1.99	7.58	1.7×10−06	UP	Long intergenic non-protein coding RNA 340
	29092	LINC00339	−1.55	9.20	4.0×10−03	DOWN	Long intergenic non-protein coding RNA 339
	79992	AGPAT4-IT1	1.50	8.13	2.5×10−04	UP	AGPAT4 intronic transcript 1
	388815	LINC00478	3.03	8.11	2.7×10−08	UP	Long intergenic non-protein coding RNA 478

^aHub ncRNA. OxPt, oxaliplatin; nc, noncoding.