Table 3:
Assessment of genome assembly and annotation completeness of the mustache toad and other amphibian genomes, using BUSCO
| Library | V. ailaonica (eukaryota) | V. ailaonica (metazoa) | Nanorana parkeri (eukaryota) | Xenopus tropicalis (eukaryota) | Rhinella marina (eukaryota) | Rana catesbeiana (eukaryota) | Ambystoma mexicanum (eukaryota) |
|---|---|---|---|---|---|---|---|
| Complete genes (%) | 80.8 | 85.1 | 90.1 | 90.1 | 90.4 | 58.0 | 24.4 |
| Complete and single-copy genes (%) | 78.2 | 83.6 | 87.8 | 88.1 | 86.1 | 55.4 | 23.4 |
| Complete and duplicated genes (%) | 2.6 | 1.5 | 2.3 | 2.0 | 4.3 | 2.6 | 1.0 |
| Fragmented genes (%) | 8.9 | 4.9 | 3.6 | 2.0 | 3.3 | 20.8 | 24.4 |
| Missing genes (%) | 10.3 | 10.0 | 6.3 | 7.9 | 6.3 | 21.2 | 51.2 |
Note: Both “eukaryote” and “metazoan” are 2 core gene sets in the BUSCO database.