KEY RESOURCES TABLE

REAGENT or RESOURCE	SOURCE	IDENTIFIER
Antibodies
N56LS	Generated in-house as previously described (Walker et al., 2011, Huang et al., 2016)	N/A
VRC01	Generated in-house as previously described (Ko et al., 2014)	N/A
VRC01LS	Generated in-house as previously described (Ko et al., 2014)	N/A
VRC07–523LS	Generated in-house as previously described (Rudicell et al., 2014)	N/A
Bacterial and Virus Strains
SHIVBG505	Generated in-house as previously described (Li et al., 2016)	N/A
SHIVBaL P4	Generated in-house as previously described (Pal et al., 2003)	N/A
SHIVSF162P3	Generated in-house as previously (Harouse et al., 2001; Tan et al., 1999)	N/A
Biological Samples
N/A	N/A	N/A
Chemicals, Peptides, and Recombinant Proteins
N/A	N/A	N/A
Critical Commercial Assays
N/A	N/A	N/A
Deposited Data
N/A	N/A	N/A
Experimental Models: Cell Lines
TZM-bl cells (also called JC53BL-1)	NIH AIDS Research and Reference Reagent Program	Cat. no. 8129
Experimental Models: Organisms/Strains
Indian origin, outbred, young adult male and female rhesus monkeys (Macaca mulatta) that did not express the class I alleles Mamu-A*01, Mamu-B*08, and Mamu-B*17	Alphagenesis Inc., Yermasse, SC	N/A
Oligonucleotides
N/A	N/A	N/A
Recombinant DNA
N/A	N/A	N/A
Software and Algorithms
glmnet R package	Friedman et al., 2010	https://cran.r-project.org/web/packages/glmnet/glmnet.pdf
randomForest R package	Liaw and Weiner, 2002	Version 46–14 at https://www.stat.berkeley.edu/~breiman/RandomForests/
e1071 R package	N/A	https://cranr-projectorg/web/packages/e1071/indexhtml
xgboost R package	Chen and Guestrin, 2016	https://cran.r-project.org/web/packages/xgboost/xgboost.pdf
SuperLearner R package	Van der Laan, Polley, and Hubbard, 2007; Polley et al., 2011	https://cran.r-project.org/web/packages/SuperLearner/index.html
Other
N/A	N/A	N/A