Table 1.
Provenances of new Potato virus Y isolates used in this study.
| Sample | Isolate | Host species | Cultivar/breeding line name | Peruvian region where sample was collected/obtained | Latitude | Longitude | Collection year | GenBank code | Phylogroup |
|---|---|---|---|---|---|---|---|---|---|
| 1 | Cca01 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Perricholi | Chente, Huambos, Chota, Cajamarca | −6.45626 | −78.94315 | 2016 | MH795841 | O3 |
| 2 | Cca07 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Perricholi | Chente, Huambos, Chota, Cajamarca | −6.45626 | −78.94315 | 2016 | MH795842 | O3 |
| 3 | Cca10 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Perricholi | Chente, Huambos, Chota, Cajamarca | −6.45626 | −78.94315 | 2016 | MH795843 | O3 |
| 4 | Czo18 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Cartonpata, Limatambo, Anta, Cusco | −13.45326 | −72.40752 | 2016 | MH795844 | N3 |
| 5 | Czo24 | S. tuberosum ssp. andigena | Ccompis | Ayaviri (Pampacona), Limatambo, Anta, Cusco | −13.45755 | −72.39146 | 2016 | MH795872 | N1 |
| 6 | Czo25 | S. tuberosum ssp. andigena | Ccompis | Ayaviri (Pampacona), Limatambo, Anta, Cusco | −13.45755 | −72.39146 | 2016 | MH795871 | N1xN2 |
| 7 | Czo29 | S. tuberosum ssp. andigena | Ccompis | Ayaviri (Pampacona), Limatambo, Anta, Cusco | −13.45755 | −72.39146 | 2016 | MH795870 | N1 |
| 8 | Czo31 | S. tuberosum ssp. andigena | Ccompis | Ayaviri (Pampacona), Limatambo, Anta, Cusco | −13.45755 | −72.39146 | 2016 | MH795845 | N1xN2 |
| 9 | Czo37 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | San Martin, Ancahuasi, Anta, Cusco | −13.44399 | −72.32522 | 2016 | MH795869 | N1 |
| 10 | Czo42 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | San Martin, Ancahuasi, Anta, Cusco | −13.44399 | −72.32522 | 2016 | MH795846 | N3 |
| 11 | Czo46 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Tiwicte, Huanoquite, Paruro, Cusco | −13.68634 | −72.0074 | 2016 | MH795868 | N1 |
| 12 | Czo56 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Tiwicte 2, Huanoquite, Paruro, Cusco | −13.70214 | −71.99798 | 2016 | MH795867 | N1 |
| 13 | Czo64 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Tiwicte 2, Huanoquite, Paruro, Cusco | −13.70214 | −71.99798 | 2016 | MH795864 | N1 |
| 14 | Czo72 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Taray, Yaurisque, Paruro, Cusco | −13.68939 | −71.95618 | 2016 | MH795866 | N1 |
| 15 | Czo75 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Taray, Yaurisque, Paruro, Cusco | −13.68939 | −71.95618 | 2016 | MH795863 | N3 |
| 16 | Czo102 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Canchan | Pilco, Challabamba, Paucartambo, Cusco | −13.17801 | −71.66427 | 2016 | MH795847 | N3 |
| 17 | Czo110 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Canchan | Pilco, Challabamba, Paucartambo, Cusco | −13.17801 | −71.66427 | 2016 | MH795848 | N3 |
| 18 | Czo129 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Paucana, Colquepata, Paucartambo, Cusco | −13.34083 | −71.69811 | 2016 | MH795862 | N3 |
| 19 | Czo132 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Cica | Paucana, Colquepata, Paucartambo, Cusco | −13.34083 | −71.69811 | 2016 | MH795865 | N1 |
| 20 | Hco26 | S. tuberosum ssp. tuberosum × S. tuberosum spp. andigena | Capiro | Acomayo road, Huanuco, Huanuco | −9.79563 | −76.00653 | 2016 | MH795849 | O1 |
| 21 | Hco28 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Canchan | Pillao community, Minas Pillao, Huanuco, Huanuco | −9.79425 | −75.99822 | 2016 | MH795850 | N2 |
| 22 | Hco29 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Canchan | Pillao community, Minas Pillao, Huanuco, Huanuco | −9.79425 | −75.99822 | 2016 | MH795851 | O1 |
| 23 | Hco30 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Canchan | Pillao community, Minas Pillao, Huanuco, Huanuco | −9.79425 | −75.99822 | 2016 | MH795852 | O1 |
| 24 | Hco38 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Yungay | Jircahuasi, Umari, Pachitea, Huanuco | −9.89973 | −76.03152 | 2016 | MH795853 | O1 |
| 25 | Hco39 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Yungay | Jircahuasi, Umari, Pachitea, Huanuco | −9.89973 | −76.03152 | 2016 | MH795854 | O1 |
| 26 | Hco41 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Yungay | Jircahuasi, Umari, Pachitea, Huanuco | −9.89973 | −76.03152 | 2016 | MH795855 | O1 |
| 27 | Hco42 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Yungay | Jircahuasi, Umari, Pachitea, Huanuco | −9.89973 | −76.03152 | 2016 | MH795856 | O1 |
| 28 | Hco45 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Yungay | Jircahuasi, Umari, Pachitea, Huanuco | −9.89973 | −76.03152 | 2016 | MH795857 | N2 |
| 29 | Jin94 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Perricholi | Barrio Chilca, Santa Rosa de Ocopa, Concepcion, Junin | −11.87439 | −75.28642 | 2016 | MH795858 | N2 |
| 30 | Jin95 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Perricholi | Barrio Chilca, Santa Rosa de Ocopa, Concepcion, Junin | −11.87439 | −75.28642 | 2016 | MH795859 | N2 |
| 31 | Jin96 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Perricholi | Barrio Chilca, Santa Rosa de Ocopa, Concepcion, Junin | −11.87439 | −75.28642 | 2016 | MH795860 | N2 |
| 32 | Jin125 | S. tuberosum ssp. tuberosum × S. tuberosum ssp. andigena | Yungay | Mariscal Castilla, Concepcion, Junin | −11.61828 | −75.09151 | 2016 | MH795861 | N2 |