Table 2. Asclepias syriaca sequencing summary.
| Library type | Insert size (bp) | Machine | Lanes | Read length (bp) | Clusters | Raw yield (Mbp) | Processed yield (Mbp) | SRA |
|---|---|---|---|---|---|---|---|---|
| Paired-end | 225 | GA II | 5 | 120 | 193,332,028 | 46,400 | 29,171 | SRX2164079 |
| Paired-end | 450 | GA II | 1 | 80 | 22,244,539 | 3,559 | 1,530 | SRX322144 |
| Mate-pair | 2,000 | MiSeq | 1/15 | 76 | 257,750 | 39 | 34 | SRX2164126 |
| Mate-pair | 2,750 | HiSeq 2000 | 1/3 | 101 | 46,704,483 | 9,434 | 2,819 | SRX322145 |
| Mate-pair | 3,500 | MiSeq | 1 | 33 | 5,815,961 | 384 | 195 | SRX322148 |
| RNA-Seq Buds | – | HiSeq 2000 | 1/4 | 101 | 48,085,747 | 4,857 | 2,812 | SRX2432900 |
| RNA-Seq Leaf | – | HiSeq 2000 | 1/4 | 101 | 64,772,831 | 6,542 | 3,787 | SRX2435668 |
| Paired-end total | 215,576,567 | 49,959 | 30,701 | |||||
| Mate-pair total | 52,778,194 | 9,857 | 3,048 | |||||
| RNA-Seq total | 112,858,578 | 11,399 | 6,599 | |||||
Note:
Machine, Illumina instrument that performed the sequencing; Raw yield, Processed yield, Total Mbp of sequence data before and after read processing. SRA, NCBI Short Read Archive accession number.