Table 3. Asclepias syriaca assembly statistics.
Minimum scaffold | Sum (Mbp) | N80 | N50 | N20 | # scaffolds |
---|---|---|---|---|---|
77 (all) | 265.9 | 317 | 1,454 | 7,080 | 508,851 |
200 | 229.7 | 621 | 1,904 | 8,967 | 221,940 |
1,000 | 156.6 | 1,633 | 3,415 | 14,019 | 54,266 |
10,000 | 42.82 | 12,894 | 18,998 | 30,689 | 2,343 |
Note:
Minimum scaffold: The minimum scaffold size (bp) used for calculations. Sum: The sum of the lengths of all included scaffolds, not including gaps. N80, N50, N20: The length (bp) of the shortest scaffold in the set of largest scaffolds needed to equal or exceed (N/100)(Sum). # scaffolds: Total scaffolds ≥ the minimum size.