Table 1.
(Continued).
| Sub-type | S122 DGNRT |
R155 CGIKLNQSTW |
A156 GHKLMSTV |
V158A | A166T | D168 Anyone |
I170 TV |
L175M |
|---|---|---|---|---|---|---|---|---|
| 1a | 6.43G,0.85N,0.18T,0.01R | 0.96K, 0.01M, 0.04T, 0.01S | 0.04T | 0.01 | . | 0.23E, 0.01G,0.01N | 5.49V,0.11T | 2.32 |
| 1b | 9.34G,4.46T,3.2N,0.04R | . | 0.01T | . | 0.03 | 0.67E, 0.03Q,0.01V | 66.1V,0.15T | 96.4 |
| 1c | 80N | . | . | . | . | . | 80V | . |
| 1d | 6.67T | . | . | . | . | . | 100V | 100 |
| 1e | 73.3N,20.0T | . | . | . | . | . | 93.3V | . |
| 1g | 20N | . | . | . | . | . | 100V | . |
| 1h | 16.7T | 16.67K | . | . | . | . | 100V | 100 |
| 1i | . | . | . | . | . | . | 100V | 100 |
| 1j | 100N | . | . | . | . | . | 100V | . |
| 1k | 100T | . | . | . | . | . | . | . |
| 1l | 22.2T, 11.1N |
. | . | . | . | . | 88.9V | . |
| 1m | 50T | . | . | . | . | . | . | . |
| 1n | . | . | . | . | . | . | . | 50 |
| 2a | 1.89R | . | . | . | . | . | 1.89V | 1.89 |
| 2b | 100R | . | . | . | . | . | 1.80V | . |
| 2c | 100R | . | . | . | . | . | . | . |
| 2d | 100R | . | . | . | . | . | . | . |
| 2e | 100R | . | . | . | . | . | . | . |
| 2f | 100R | . | . | . | . | . | . | . |
| 2i | 100R | . | . | 25 | . | . | . | . |
| 2j | 100R | . | . | . | . | . | . | . |
| 2k | 75R | . | . | . | . | . | 25V | 25 |
| 2l | 100R | . | . | . | . | . | 100V | . |
| 2m | 100R | . | . | . | . | . | . | . |
| 2q | 100R | . | . | . | . | . | . | . |
| 2r | 100T | . | . | . | . | . | . | . |
| 2t | 100R | . | . | . | . | . | . | . |
| 2u | . | . | . | . | . | . | . | . |
| 3a | 0.37T | 0.25K | 0.12G | . | 5.59T | 98.9Q,0.50R,0.13H/K | 4.41V | 0.13 |
| 3b | 0.73T | 5.07I, 4.35M | . | . | . | 100Q | . | . |
| 3d | . | . | . | . | . | 100Q | . | . |
| 3e | . | . | . | . | . | 100Q | . | . |
| 3g | . | . | . | . | . | 100Q | . | . |
| 3h | . | . | . | . | . | 100Q | . | . |
| 3i | . | . | . | . | . | 100Q | 100V | . |
| 3k | . | . | . | . | . | 100Q | . | . |
| 4a | 96.7T | . | . | . | . | . | 90.6V | . |
| 4b | 50T | . | . | . | . | . | 100V | . |
| 4c | 100T | . | . | . | . | . | 100V | . |
| 4d | 95.7T | . | . | . | 1.75 | . | 98V | . |
| 4f | 100T | . | . | . | . | . | 100V | . |
| 4g | 100T | . | . | . | . | . | 100V | . |
| 4k | 100T | . | . | . | . | . | 100V | . |
| 4l | 100T | . | . | . | . | . | 100V | . |
| 4m | . | . | . | . | . | . | 75V | . |
| 4n | 100T | . | . | . | . | . | 100V | . |
| 4o | 100T | . | . | . | . | . | 100V | . |
| 4p | 100T | . | . | . | . | . | 100V | . |
| 4q | 100N | . | . | . | . | . | 100V | . |
| 4r | 100T | . | . | . | . | . | 100V | . |
| 4s | 100N | . | . | . | . | 100T | 100V | . |
| 4t | 100T | . | . | . | . | . | 100V | . |
| 4v | 75N | . | . | . | . | . | 100V | . |
| 4w | 100T | . | . | . | . | . | 100V | . |
| 5a | 73.9T | . | . | . | . | 43.5E | 8.7V | . |
| 6a | 76.3N,0.49D/G | . | . | . | 0.49 | 1.71E | 0.24V | 100 |
| 6b | 100T | . | . | . | . | . | . | 100 |
| 6c | . | . | . | . | . | . | 100V | 100 |
| 6d | 100T | . | . | . | . | . | 100V | 100 |
| 6e | 80T | . | . | . | . | . | 100V | 100 |
| 6f | 100T | . | . | . | . | . | 100V | 100 |
| 6g | 100N | . | . | . | . | 50E | 100V | 100 |
| 6h | 100N | . | . | . | . | . | 80V,20A | 100 |
| 6i | . | . | . | . | . | . | 100V | 100 |
| 6j | 100N | . | . | . | . | . | 100V | 100 |
| 6k | 100T | . | . | . | . | . | 100V | 100 |
| 6l | 25N,25T | . | 12.5V | . | . | . | 100V | 100 |
| 6m | 100T | . | . | . | . | . | . | 100 |
| 6n | 100N | . | . | . | . | . | 100V | 100 |
| 6o | 100T | . | . | . | . | . | 100V | 100 |
| 6p | 100T | . | . | . | . | . | 100V | 100 |
| 6q | 100T | . | . | . | . | . | 100V | 100 |
| 6r | 100T | . | . | . | . | . | 100V | 100 |
| 6s | 66.7T | . | . | . | . | . | 100V | 100 |
| 6t | 100T | . | . | . | . | . | 100V | 100 |
| 6u | 100T | . | . | . | . | . | 100V | 100 |
| 6v | 100T | . | . | . | . | . | 100V | 100 |
| 6w | . | . | . | . | . | . | 100V | 100 |
| 6xa | 100T | . | . | . | . | . | 100V | 100 |
| 6xb | 100T | . | . | . | . | . | 50V | 100 |
| 6xc | 100T | . | . | . | . | . | . | 100 |
| 6xd | 66.7N | . | . | . | . | . | 100V | 100 |
| 6xe | 100T | . | . | . | . | . | 100V | 100 |
| 6xf | 100T | . | . | . | . | . | 100V | 100 |
| 7a | 100G | . | . | . | . | 100Q | 100V | 100 |
| 7b | . | . | . | . | . | 100Q | . | . |
Notes: Data are presented as %. The dot denotes 0%. aNot all the positions were analyzed using the same number of sequences. The first figure is the lowest number, and the second figure is the largest number. n.a.: not applicable because of different natural amino acid sequences in the respective HCV genotype/subtype (NS3 V170 and M175 are the dominant amino acids in GT1b).