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. 2019 Sep 4;11(4):154–164. doi: 10.3892/br.2019.1238

Table III.

Characteristics of the genotyped SNPs of the ADIPOQ and EDN1 genes.

A, ADIPOQ
No. SNP Location (GRCh38.p12) Relation Major/minor allele MAF EUR Observed MAF Pairwise r2 of linkage disequilibriuma
1 rs17366743 3:186854300 Exon 3 coding non-synonymous T/C 0.04 0.02 0.04(1-3); 0.05(1-4); 0.03(1-5)
2 rs17300539 3:186841671 Promoter G/A 0.07 0.07 0.02(2-3); 0.04(2-4)
3 rs266729 3:186841685 Promoter C/G 0.28 0.29 0.64(3-4)b; 0.02(3-5)
4 rs182052 3:186842993 Intron G/A 0.39 0.38 0.04(4-5)
5 rs2241766 3:186853103 Exon 2 coding non-synonymous T/G 0.13 0.06  
B, EDN1
No. SNP Location (GRCh38.p12) Relation to gene Major/minor allele MAF EUR Observed MAF Pairwise r2 of linkage disequilibriuma
1 rs2070699 6:12292539 Intron G/T 0.47 0.5 0.04(1-2); 0.23(1-3)
2 rs1800542 6:12292295 Intron G/A 0.04 0.04  
3 rs1800543 6:12293904 Intron T/C 0.22 0.21  

aReported for P<0.05, SNP numbers in brackets;

bPotential linkage between the SNPs indicated in brackets. SNP, single-nucleotide polymorphism;ADIPOQ, adiponectin; EDN1, endothelin-1; GRCh38.p12, Genome Reference Consortium human build 38 patch release 12; MAF, minor allele frequency; MAF EUR, European MAF according to Ensembl release 95.