Table 1. Amino acid sequences from the HA-epitopes used in the VC4-flagellin construct; aa positions from their respective consensus IV are also indicated.
| HA-epitopes | Aa positions* | Consensus virus subtype | GenBank Id |
|---|---|---|---|
| PQRERRRKKRGLFGAIA | 337–357 | H5N1 | AAC32098.1 |
| GVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLTI | 41–77 | H7N1 | AGT40751.1 |
| 37–71 | H7N7 | ACN80240.1 | |
| 33-67/37-71 | H7N8 | AFP99768.1 | |
| 41–75 | H7N9 | ASV61404.1 | |
| GVEVVNATETVERTNIPRICSKGKRTVDLGQCGL | 41–74 | H7N3 | APD70004.1 |
| H7N6 | ANK78016.1 | ||
| H7N7 | ANC28237.1 | ||
| H7N9 | AJU15322.1 | ||
| SLPFQNIHPITIGKCPKYVKSTKLRLATGLRNV | 168–200 | H1N1 | ALN12227.1 |
*the most common aa positions of HA-epitopes; though they also could be encountered in other aa positions.
The aa positions shown are according to the reference cited from the GenBank database. Abbreviations: aa = amino acid; HA = hemagglutinin; Id = identification