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. Author manuscript; available in PMC: 2020 May 6.
Published in final edited form as: Dev Cell. 2019 May 6;49(3):444–460.e9. doi: 10.1016/j.devcel.2019.04.007

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER

Antibodies

Mouse monoclonal anti-phospho-p44/42 MAPK (Erk1/2) (T202/Y204) Cell Signaling E10; Cat#9106; RRID: AB_331768
Rabbit polyclonal anti-ERK 1 Santa Cruz C-16; Cat#sc-93; RRID: AB_631453
Rabbit polyclonal anti-phospho-MEK 1/2 (S217/S221) Cell Signaling Cat#9121; RRID: AB_331648
Rabbit polyclonal anti-MEK 1/2 Cell Signaling Cat#9122; RRID: AB_823567
Mouse monoclonal anti-Cyclin D1 Santa Cruz A-12; Cat#sc-8396; RRID: AB_627344
Rabbit polyclonal anti-GAPDH Sigma-Aldrich Cat#G9545; RRID: AB_796208
Rabbit monoclonal anti-phospho-FAK (Y397) Cell Signaling D20B1; Cat#8556; RRID: AB_10891442
Rabbit monoclonal anti-FAK Cell Signaling D2R2E; Cat#13009; RRID: AB_2798086
Rabbit polyclonal anti-phospho-Paxillin (Y118) Cell Signaling Cat#2541; RRID: AB_2174466
Mouse monoclonal anti-phospho-Paxillin (Y31) R&D Systems Cat# MAB61641; RRID: AB_10972644
Rabbit monoclonal anti-Paxillin Abcam Y113; ab32084; RRID: AB_779033
Mouse monoclonal anti-Talin Sigma-Aldrich Cat# T3287; RRID: AB_477572
Mouse monoclonal anti-β-Actin Sigma-Aldrich AC-15; Cat#A1978; RRID: AB_476692
Rabbit monoclonal anti-RhoA Cell Signaling 67B9; Cat#2117; RRID: AB_10693922
Rabbit polyclonal anti-phospho-Myosin Light Chain 2 (T18/S19) Cell Signaling Cat#3674; RRID: AB_2147464
Rabbit monoclonal anti-Myosin Light Chain 2 Cell Signaling D18E2; Cat#8505; RRID: AB_2728760
Mouse monoclonal anti-JNK Santa Cruz D-2; sc-7345; RRID: AB_675864
Mouse monoclonal anti-phospho-JNK Santa Cruz G-7; sc-6254; RRID: AB_628232
Rabbit polyclonal anti-phospho-Merlin (S518) Cell Signaling Cat#9163; RRID: AB_2149793
Rabbit monoclonal anti-Merlin Cell Signaling D3S3W; Cat#12888; RRID: AB_2650551
Mouse monoclonal anti-NF2 Santa Cruz B-12; Cat# sc-55575; RRID: AB_831599
Rabbit polyclonal anti-RFP Rockland Cat# 600–401-379; RRID: AB_2209751
Mouse monoclonal anti-phospho-Histone H3 (S10) Cell Signaling 6G3; Cat#9706; RRID: AB_331748
Rabbit polyclonal anti-PAK 1 abcam Cat#ab154284
Goat polyclonal anti-Rabbit IgG, Alexa Fluor 488-conjugated secondary ThermoFisher Cat#A11034; RRID: AB_2576217
Donkey polyclonal anti-Rabbit IgG, Alexa Fluor 647-conjugated secondary ThermoFisher Cat# A31573; RRID: AB_2536183
Donkey polyclonal anti-Mouse IgG, Alexa Fluor 568-conjugated secondary ThermoFisher Cat# A10037; RRID: AB_2534013
Mouse monoclonal anti-ARP3 Santa Cruz A-1; sc-48344; RRID: AB_626700
Mouse monoclonal anti-p34-ARC (ARPC2) Santa Cruz F-5; sc-515754
Mouse monoclonal anti-p41-ARCb (ARPC1B) Santa Cruz C-3; sc-137125; RRID: AB_2289927
Rabbit polyclonal anti-ARPC1A Sigma-Aldrich HPA004334; RRID: AB_1078215

Chemicals, Peptides, and Recombinant Proteins

mNeonGreen-Paxillin-22 Allele Biotechnology http://www.allelebiotech.com/mneongreen-fusions-and-constructs/
mNeonGreen-Actin-C-35 Allele Biotechnology http://www.allelebiotech.com/mneongreen-fusions-and-constructs/
Dabrafenib Selleckchem S2807
Trametinib Selleckchem S2673
SB203580 Selleckchem S1076
YAP-TEAD Inhibitor 1 (Peptide 17) Selleckchem S8164
SMIFH2 Tocris S4826
CK666 Sigma-Aldrich 182515
CK689 Sigma-Aldrich 182517
(−)-Blebbistatin Sigma-Aldrich B0560
ROCK Inhibitor Sigma-Aldrich Y-27632; SCM075
SCH772984 ChemieTek CT-SCH772
Bovine collagen, Type 1 Advanced Biomatrix 5133
Collagenase Advanced Biomatrix 5030
Poly-L-Lysine Sigma-Aldrich P8920
Fibronectin Sigma-Aldrich F1141
Laminin Santa Cruz sc-29012

Critical Commercial Assays

QuikChange Lightning Mutagenesis Kit Agilent 210515
Biotin-Avidin Blocking Kit Vector Laboratories SP-2001,
Vector M.O.M Peroxidase-based Immunodetection Kit Vector Laboratories N/A
ImmPACT DAB Peroxidase Substrate Kit Vector Laboratories SK-4105
ImmPRESS-AP Reagent Anti-Rabbit IgG alkaline phosphatase-based staining kit Vector Laboratories MP-5401
ImmPACT Vector Red alkaline phosphatase substrate Vector Laboratories SK-5105
Click-iT Plus EdU Alexa Fluor Imaging Kits (555 and 488) Molecular Probes C10638 (555) and C10637 (488)
Click-iT Plus Edu Alexa Fluor Flow Cytometry Kit Molecular Probes C10632

Experimental Models: Cell Lines

Human melanoma: A375 ATCC Cat# CRL-1619; RRID: CVCL_0132
Human melanoma: IGR1 DSMZ Cat# ACC-236; RRID: CVCL_1303

Experimental Models: Organisms/Strains

Mouse: Adult female NOD/SCID IL2Rγnull mice S. Morrison (Quintana et al., 2012) https://www.jax.org/strain/005557; RRID: IMSR_JAX:005557

Oligonucleotides

Rac1P29S QuikChange primer (forward): CTGATCAGTTACACAACCAATGCATTTTCTGGAGAATATATCCC This paper N/A
Rac1P29S QuikChange primer (reverse): GGGATATATTCTCCAGAAAATGCATTGGTTGTGTAACTGATCAG This paper N/A
CRISPR editing Rac1P29S to Rac1WT: sgRNA guide sequence 1: 5’- TACACAACCAATGC ATTTTC-3’ This paper N/A
CRISPR editing Rac1P29S to Rac1WT: sgRNA guide sequence 2: 5’- ATATTCTCCAGAAAA TGCAT-3’ This paper N/A
CRISPR editing Rac1P29S to Rac1WT: ssODN repair sequence 1: AAGATACTTACACAGTAGGGATATATTCTCCAGGAAATGCATTGGTTGTGTAACTGATCAGTAGGCAAGT This paper N/A
CRISPR editing Rac1P29S to Rac1WT: ssODN repair sequence 2: AAAACTTGCCTACTGATCAGTTACACAACCAATGCATTTCCTGGAGAATATATCCCTACTGTGTAAGTAT This paper N/A
CRISPR knockout of ARPC1B: sgRNA guide sequence: 5’-CTCGTGCACCTTGGTCCATT-3’ This paper N/A

Recombinant DNA

pcDNA3-GFP-Rac1 (Wild Type) Cell Biolabs, inc. STA-450, 345001
pcDNA3-GFP-Rac1 P29S This paper N/A
pLVX-Puro Clontech 632164
pLVX-Puro-Rac1WT This paper N/A
pLVX-Puro-RaclP29S This paper N/A
pLVX-shRNA2 Clontech 632179
pLVX-CMV100-mNeonGreen-Paxillin-22 This paper N/A
pLVX-CMV300-mNeonGreen-Actin-C-35 This paper N/A
pcDNA-NF2 (Wild Type) D. Pan N/A
pcDNA-NF2-S518A D. Pan N/A
pLVX-Puro-NF2 (Wild Type) This paper N/A
pLVX-Puro-NF2-S518A This paper N/A
dsRed2-P2A-Luc S. Morrison (Piskounova et al., 2015) N/A
pSpCas9(BB)-2A-GFP (PX458) Ran et al., 2013. Addgene ID: 48138, RRID: Addgene_48138

Software and Algorithms

Ilastik https://www.ilastik.org/ RRID:SCR_015246
Matlab The MathWorks, Inc.; https://www.mathworks.com/products/matlab.html RRID:SCR_001622
Fiji http://fiji.sc/ RRID:SCR_002285
GraphPad Prism https://www.graphpad.com/ RRID:SCR_002798
U-track Particle Tracking (Version 2.2.1) Danuser Lab (Jaqaman et al., 2008) http://www.utsouthwestern.edu/labs/danuser/software/
Traction Force Analysis (Version 1.1.3) Danuser Lab (Han et al., 2015) http://www.utsouthwestern.edu/labs/danuser/software/
Focal Adhesion Segmentation Danuser Lab (Han et al., 2015) http://www.utsouthwestern.edu/labs/danuser/software/
Immunofluorescence Localization Analysis This paper N/A
Lamellipodia Widths Analysis This paper N/A
CRISPR Design Tool http://tools.genome-engineering.org
CRISPOR http://crispor.tefor.net
Benchling https://benchling.com/ RRID:SCR_013955