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. 2019 Sep 25;9:13837. doi: 10.1038/s41598-019-49520-3

Table 3.

Primers and cycling conditions used in this study.

Target region/gene Amplicon size Primer name Primer Sequences (5′ → 3′) Cycling conditions Reference
16S rRNA gene (bacterial DNA) 146 bp q16S-univF GTGSTGCAYGGYTGTCGTCA 95 °C 45x 95 °C 53 °C 72 °C Maeda et al.90
q16S-univR ACGTCRTCCMCACCTTCCTC 10 min 20 s 30 s 20 s
GAPDH (human DNA) 74 bp TGCACCACCAACTGCTTAGC 95 °C 40x 95 °C 65 °C Vandesompele et al.91
GGCATGGACTGTGGTCATGAG 10 min 10 s 60 s
V3/V4 16S rRNA gene (library preparation) ~460 bp s16S_F TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG-InnerTag-CCTACGGGNGGCWGCAG 95 °C 25x 95 °C 55 °C 72 °C 72 °C Klindworth et al.79
s16S_R GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG- InnerTag-GACTACHVGGGTATCTAATCC 3 min 30 s 30 s 30 s 5 min