antibodies |
Mouse monoclonal anti-Flag |
Sigma-Aldrich |
F3165 |
Rabbit polyclonal anti-Flag |
Sigma-Aldrich |
F7425 |
Mouse monoclonal anti-GFP |
Abclonal |
AE012 |
Rabbit polyclonal anti-GFP |
ABCAM |
ab290 |
Rabbit polyclonal anti-GFP |
Invitrogen |
A11122 |
Rabbit polyclonal anti-GFP |
This study |
ANTI #76 (Home-Made antibody) |
Mouse monoclonal anti-CENP-A |
Stressgen, Enzo Life Sciences |
KAM-CC006 |
Rabbit polyclonal anti-CENP-A |
Upstate |
07–574 |
Mouse monoclonal anti-CENP-B |
Novus Biologicals |
H00001059-B01P |
Rabbit polyclonal anti-CENP-B |
abcam |
ab25734 |
Rabbit polyclonal anti-HJURP |
Proteintech Group Inc. |
15283–1-AP |
Rabbit polyclonal anti-GAPDH |
ABCAM |
ab37168 |
Rabbit polyclonal anti-GAPDH |
Invitrogen |
PA1987 |
Rabbit polyclonal anti-Ubiquitin |
Bethyl Laboratories |
A300–317A-1 |
Affinity-purified secondary antibody Alexa Fluor 488 Goat anti-Mouse IgG |
Invitrogen |
A11001 |
Affinity-purified secondary antibody Alexa Fluor 594 Goat anti-Mouse IgG |
Invitrogen |
A11005 |
Affinity-purified secondary antibody Alexa Fluor 488 Goat anti-Rabbit IgG |
Invitrogen |
A11008 |
Affinity-purified secondary antibody Alexa Fluor 594 Goat anti-Rabbit IgG |
Invitrogen |
A11012 |
Affinity-purified secondary antibody Alexa Fluor Plus 488 Goat anti-Mouse IgG |
Invitrogen |
A32723 |
Affinity-purified secondary antibody Alexa Fluor Plus 555 Goat anti-Rabbit IgG |
Invitrogen |
A32732 |
Chemicals, Peptides, and Recombinant Proteins |
Fetal bovine serum (FBS) |
Gibco, Invitrogen |
10082–147 |
100 units penicillin/100 μg streptomycin |
Gibco, Invitrogen |
15140–148 |
High-glucose Dulbecco’s modified Eagle’s (DMEM) medium |
BioWhittaker |
12–604f |
Lipofectamine 3000 |
Invitrogen |
L3000–008 |
Polyethylenimine (PEI) |
Polysciences, Inc. |
23966–2 |
Complete EDTA-free protease inhibitor cocktail |
Roche |
11-873-580-001 |
Restore Western Blot Stripping Buffer |
Thermo Scientific |
PI21059 |
Protein A Sepharose CL-4B |
GE Healthcare |
17-0963-03 |
Anti-Flag M2 affinity gel |
Sigma-Aldrich |
A2220–1 ML |
DAPI |
Sigma-Aldrich |
D9542 |
Crystal violet solution |
SigmaI-Aldrich |
HT90132–1L |
DMEM:DMEM/F12 medium |
ATCC |
30–2006 |
Experimental Models: Cell Lines (sex of cell is indicated.) |
CENP-A−/f RPE-1 cells (female) |
(Fachinetti et al., 2017), This study |
Dr. Daniele Fachinetti, Dr. Don W. Cleveland |
CENP-AF/+ RPE-1 cells (female) |
(Fachinetti et al., 2017), This study |
Dr. Daniele Fachinetti, Dr. Don W. Cleveland |
HeLa cells (female) |
(Niikura and Kitagawa, 2016; Niikura et al., 2015; Niikura et al., 2017) |
N/A |
293T cells (female) |
(Niikura et al., 2016) |
N/A |
Recombinant DNA |
pEGFP-C1 |
This study |
B161 |
pEGFP-C1-human CENP-A WT |
This study |
Dr. Yamini Dalal, B3128 |
pEGFP-C1-human CENP-A K124A |
This study |
Dr. Yamini Dalal, B3129 |
pEGFP-C1-human CENP-A K124Q |
This study |
Dr. Yamini Dalal, B3130 |
pcDNA3 |
This study |
B1512 |
pcDNA3-Flag-human CENP-A WT |
This study |
B2854 |
pcDNA3-Flag-human CENP-A K124R |
This study |
B2829 |
pcDNA3-HA-human CENP-A WT |
This study |
B2852 |
pcDNA3-HA-human CENP-A K124R |
This study |
B2836 |
pBabe-EYFP |
This study |
B3182 |
pBabe-EYFP-human CENP-A WT |
(Fachinetti et al., 2017), This study |
Dr. Daniele Fachinetti, Dr. Don W. Cleveland, B3161 |
pBabe-EYFP-human CENP-A K124R |
(Fachinetti et al., 2017), This study |
Dr. Daniele Fachinetti, Dr. Don W. Cleveland, B3164 |
pQCXIP-EYFP |
This study |
B3252 |
pQCXIP-EYFP-human CENP-A WT |
This study |
B3254 |
pQCXIP-EYFP-human CENP-A K124R |
This study |
B3256 |
pBabe-Flag-human CENP-A WT |
This study |
B3237 |
pBabe-Flag-human CENP-A K124R |
This study |
B3236 |
pBabe-untagged human CENP-A WT |
This study |
B3234 |
pBabe-untagged human CENP-A K124R |
This study |
B3235 |
pBabe-Flag-human CENP-A K124R-UbK48R |
This study |
B3271 |
pBabe-untagged human CENP-A K124R-UbK48R |
This study |
B3270 |
pCGN-HA-Ubiquitin |
(Niikura and Kitagawa, 2016; Niikura et al., 2015; Niikura et al., 2017), This study |
B2806 |
pVSV-G |
(Fachinetti et al., 2017), This study |
Dr. Daniele Fachinetti, Dr. Don W. Cleveland, B3163 |
pCMV-VSV-G |
This study |
B1197 |
pGP |
This study |
Dr. Kenji Tago (Jichi Medical Univeristy, Japan), B3189 |
pCI-VSVG |
This study |
Dr. Kenji Tago (Jichi Medical Univeristy, Japan), B3190 |
pPAM |
This study |
B3001 |
pBabe-puro |
(Niikura et al., 2016), This study |
Dr. Amruta Ashtekar, Dr. Lawrence S. Kirschner, B3028 |
pBabe-puro-Cre |
(Niikura et al., 2016), This study |
Dr. Amruta Ashtekar, Dr. Lawrence S. Kirschner, B3027 |
psPAX2 |
(Niikura et al., 2016), This study |
Dr. John Thompson, Dr. Gustavo W. Leone, B3031 |
pMD2.g |
(Niikura et al., 2016), This study |
Dr. John Thompson, Dr. Gustavo W. Leone, B3032 |
Software and Algorithms |
Odyssey CLx Infrared Imaging System |
LI-COR Biosciences |
https://www.licor.com/bio/products/imaging_systems/ |
Odyssey Fc Imaging System |
LI-COR Biosciences |
https://www.licor.com/bio/products/imaging_systems/ |
FluorChem M system |
Proteinsimple |
https://www.proteinsimple.com/fluorchem_m.html |
Image Studio Software |
LI-COR Biosciences |
https://www.licor.com/bio/products/imaging_systems/ |
Quantity One 1-D Analysis Software |
Bio-Rad |
http://www.bio-rad.com/zh-cn/product/quantity-one-1-d-analysis-software?ID=1de9eb3a-1eb5-4edb-82d2-68b91bf360fb |
ImageJ software |
NIH |
https://imagej.nih.gov/ij/ |
Olympus FLUOVIEW FV3000 confocal laser scanning microscope |
Olympus |
https://www.olympus-global.com/news/2016/nr160405fv3000e.html |
Acquisition FV31S-SW software |
Olympus |
https://www.olympus-lifescience.com.cn/en/support/downloads/#!dlOpen=%23detail847250519 |
Analysis FV31S-DT software |
Olympus |
https://www.olympus-lifescience.com.cn/en/support/downloads/#!dlOpen=%23detail847250519 |
cellSens Dimension software Ver. 1. 18 |
Olympus |
https://www.olympus-lifescience.com.cn/en/software/cellsens/ |
DM IRE2 motorized fluorescence microscope |
Leica |
https://www.leica-microsystems.com/applications/life-science/fluorescence/ |
ARC LAMP power supply HBO100 DC IGN |
Ludl Electronic Products, Ltd. |
N/A |
ORCA-ER high-resolution digital CCD camera |
Hamamatsu |
N/A |
Openlab version 5.5.2 Scientific Imaging Software |
Improvision, PerkinElmer |
http://www.perkinelmer.com/lab-products-and-services/resources/cellular-imaging-software-downloads.html |
Velocity version 6.3 3D Image Analysis Software |
Improvision, PerkinElmer |
http://www.perkinelmer.com/lab-products-and-services/resources/cellular-imaging-software-downloads.html |
Molecular Imager Versadoc MP4000 System |
Bio-Rad |
http://www.bio-rad.com/zh-cn/sku/1708640-molecular-imager-versadoc-mp-4000-system?ID=1708640 |
Quantity One 1-D Analysis Software |
Bio-Rad |
http://www.bio-rad.com/zh-cn/product/quantity-one-1-d-analysis-software?ID=1de9eb3a-1eb5-4edb-82d2-68b91bf360fb |
OpenCFU |
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0054072 |
http://opencfu.sourceforge.net/ |
Other |
Immobilon-FL PVDF Transfer Membrane |
EMD Millipore |
IPVH00010 |
NuPAGE™ 4–12% Bis-Tris Protein Gels |
Thermo Fisher |
NP0335BOX |
Coomassie brilliant blue R-250 |
BBI Life Sciences |
CAS 6104-59-2 |