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. Author manuscript; available in PMC: 2020 Sep 23.
Published in final edited form as: Dev Cell. 2019 Sep 23;50(6):683–689.e6. doi: 10.1016/j.devcel.2019.07.015

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
antibodies
Mouse monoclonal anti-Flag Sigma-Aldrich F3165
Rabbit polyclonal anti-Flag Sigma-Aldrich F7425
Mouse monoclonal anti-GFP Abclonal AE012
Rabbit polyclonal anti-GFP ABCAM ab290
Rabbit polyclonal anti-GFP Invitrogen A11122
Rabbit polyclonal anti-GFP This study ANTI #76 (Home-Made antibody)
Mouse monoclonal anti-CENP-A Stressgen, Enzo Life Sciences KAM-CC006
Rabbit polyclonal anti-CENP-A Upstate 07–574
Mouse monoclonal anti-CENP-B Novus Biologicals H00001059-B01P
Rabbit polyclonal anti-CENP-B abcam ab25734
Rabbit polyclonal anti-HJURP Proteintech Group Inc. 15283–1-AP
Rabbit polyclonal anti-GAPDH ABCAM ab37168
Rabbit polyclonal anti-GAPDH Invitrogen PA1987
Rabbit polyclonal anti-Ubiquitin Bethyl Laboratories A300–317A-1
Affinity-purified secondary antibody Alexa Fluor 488 Goat anti-Mouse IgG Invitrogen A11001
Affinity-purified secondary antibody Alexa Fluor 594 Goat anti-Mouse IgG Invitrogen A11005
Affinity-purified secondary antibody Alexa Fluor 488 Goat anti-Rabbit IgG Invitrogen A11008
Affinity-purified secondary antibody Alexa Fluor 594 Goat anti-Rabbit IgG Invitrogen A11012
Affinity-purified secondary antibody Alexa Fluor Plus 488 Goat anti-Mouse IgG Invitrogen A32723
Affinity-purified secondary antibody Alexa Fluor Plus 555 Goat anti-Rabbit IgG Invitrogen A32732
Chemicals, Peptides, and Recombinant Proteins
Fetal bovine serum (FBS) Gibco, Invitrogen 10082–147
100 units penicillin/100 μg streptomycin Gibco, Invitrogen 15140–148
High-glucose Dulbecco’s modified Eagle’s (DMEM) medium BioWhittaker 12–604f
Lipofectamine 3000 Invitrogen L3000–008
Polyethylenimine (PEI) Polysciences, Inc. 23966–2
Complete EDTA-free protease inhibitor cocktail Roche 11-873-580-001
Restore Western Blot Stripping Buffer Thermo Scientific PI21059
Protein A Sepharose CL-4B GE Healthcare 17-0963-03
Anti-Flag M2 affinity gel Sigma-Aldrich A2220–1 ML
DAPI Sigma-Aldrich D9542
Crystal violet solution SigmaI-Aldrich HT90132–1L
DMEM:DMEM/F12 medium ATCC 30–2006
Experimental Models: Cell Lines (sex of cell is indicated.)
CENP-A−/f RPE-1 cells (female) (Fachinetti et al., 2017), This study Dr. Daniele Fachinetti, Dr. Don W. Cleveland
CENP-AF/+ RPE-1 cells (female) (Fachinetti et al., 2017), This study Dr. Daniele Fachinetti, Dr. Don W. Cleveland
HeLa cells (female) (Niikura and Kitagawa, 2016; Niikura et al., 2015; Niikura et al., 2017) N/A
293T cells (female) (Niikura et al., 2016) N/A
Recombinant DNA
pEGFP-C1 This study B161
pEGFP-C1-human CENP-A WT This study Dr. Yamini Dalal, B3128
pEGFP-C1-human CENP-A K124A This study Dr. Yamini Dalal, B3129
pEGFP-C1-human CENP-A K124Q This study Dr. Yamini Dalal, B3130
pcDNA3 This study B1512
pcDNA3-Flag-human CENP-A WT This study B2854
pcDNA3-Flag-human CENP-A K124R This study B2829
pcDNA3-HA-human CENP-A WT This study B2852
pcDNA3-HA-human CENP-A K124R This study B2836
pBabe-EYFP This study B3182
pBabe-EYFP-human CENP-A WT (Fachinetti et al., 2017), This study Dr. Daniele Fachinetti, Dr. Don W. Cleveland, B3161
pBabe-EYFP-human CENP-A K124R (Fachinetti et al., 2017), This study Dr. Daniele Fachinetti, Dr. Don W. Cleveland, B3164
pQCXIP-EYFP This study B3252
pQCXIP-EYFP-human CENP-A WT This study B3254
pQCXIP-EYFP-human CENP-A K124R This study B3256
pBabe-Flag-human CENP-A WT This study B3237
pBabe-Flag-human CENP-A K124R This study B3236
pBabe-untagged human CENP-A WT This study B3234
pBabe-untagged human CENP-A K124R This study B3235
pBabe-Flag-human CENP-A K124R-UbK48R This study B3271
pBabe-untagged human CENP-A K124R-UbK48R This study B3270
pCGN-HA-Ubiquitin (Niikura and Kitagawa, 2016; Niikura et al., 2015; Niikura et al., 2017), This study B2806
pVSV-G (Fachinetti et al., 2017), This study Dr. Daniele Fachinetti, Dr. Don W. Cleveland, B3163
pCMV-VSV-G This study B1197
pGP This study Dr. Kenji Tago (Jichi Medical Univeristy, Japan), B3189
pCI-VSVG This study Dr. Kenji Tago (Jichi Medical Univeristy, Japan), B3190
pPAM This study B3001
pBabe-puro (Niikura et al., 2016), This study Dr. Amruta Ashtekar, Dr. Lawrence S. Kirschner, B3028
pBabe-puro-Cre (Niikura et al., 2016), This study Dr. Amruta Ashtekar, Dr. Lawrence S. Kirschner, B3027
psPAX2 (Niikura et al., 2016), This study Dr. John Thompson, Dr. Gustavo W. Leone, B3031
pMD2.g (Niikura et al., 2016), This study Dr. John Thompson, Dr. Gustavo W. Leone, B3032
Software and Algorithms
Odyssey CLx Infrared Imaging System LI-COR Biosciences https://www.licor.com/bio/products/imaging_systems/
Odyssey Fc Imaging System LI-COR Biosciences https://www.licor.com/bio/products/imaging_systems/
FluorChem M system Proteinsimple https://www.proteinsimple.com/fluorchem_m.html
Image Studio Software LI-COR Biosciences https://www.licor.com/bio/products/imaging_systems/
Quantity One 1-D Analysis Software Bio-Rad http://www.bio-rad.com/zh-cn/product/quantity-one-1-d-analysis-software?ID=1de9eb3a-1eb5-4edb-82d2-68b91bf360fb
ImageJ software NIH https://imagej.nih.gov/ij/
Olympus FLUOVIEW FV3000 confocal laser scanning microscope Olympus https://www.olympus-global.com/news/2016/nr160405fv3000e.html
Acquisition FV31S-SW software Olympus https://www.olympus-lifescience.com.cn/en/support/downloads/#!dlOpen=%23detail847250519
Analysis FV31S-DT software Olympus https://www.olympus-lifescience.com.cn/en/support/downloads/#!dlOpen=%23detail847250519
cellSens Dimension software Ver. 1. 18 Olympus https://www.olympus-lifescience.com.cn/en/software/cellsens/
DM IRE2 motorized fluorescence microscope Leica https://www.leica-microsystems.com/applications/life-science/fluorescence/
ARC LAMP power supply HBO100 DC IGN Ludl Electronic Products, Ltd. N/A
ORCA-ER high-resolution digital CCD camera Hamamatsu N/A
Openlab version 5.5.2 Scientific Imaging Software Improvision, PerkinElmer http://www.perkinelmer.com/lab-products-and-services/resources/cellular-imaging-software-downloads.html
Velocity version 6.3 3D Image Analysis Software Improvision, PerkinElmer http://www.perkinelmer.com/lab-products-and-services/resources/cellular-imaging-software-downloads.html
Molecular Imager Versadoc MP4000 System Bio-Rad http://www.bio-rad.com/zh-cn/sku/1708640-molecular-imager-versadoc-mp-4000-system?ID=1708640
Quantity One 1-D Analysis Software Bio-Rad http://www.bio-rad.com/zh-cn/product/quantity-one-1-d-analysis-software?ID=1de9eb3a-1eb5-4edb-82d2-68b91bf360fb
OpenCFU https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0054072 http://opencfu.sourceforge.net/
Other
Immobilon-FL PVDF Transfer Membrane EMD Millipore IPVH00010
NuPAGE™ 4–12% Bis-Tris Protein Gels Thermo Fisher NP0335BOX
Coomassie brilliant blue R-250 BBI Life Sciences CAS 6104-59-2