Table 1.
Gene-specific primers used for RT-qPCR assays.
Gene symbol | Accession code | Sense primer (5′-3′) | Antisense primer (5′-3′) | Primer efficiency (%) | Fragment length (bp) |
---|---|---|---|---|---|
irak3 (all variants) | LN828695 | TGGACTCGTCTATGTACCTGTAT | GCGCCATCCGAGGCTGTCAT | 99.3 | 95 |
irak3 (full-length) | LR031305 | CCCTGCTGAGAAACGTCCTAC | GGTCTGTTGCGTGGTCGTGTA | 99.2 | 162 |
il1rl1(st2) | NM_001281424 | GATCTGAGGATGGGAAGGTCTA | CTGCCGTGGATGAAGAGTCTAA | 98.0 | 154 |
tollip | AJ878917 | GTGGTACAGCCTCAGTGGCA | GCTGATAGACTGTGGGCATGA | 106.3 | 131 |
inpp5d (ship1) | XM_021615844 | CAAACCCTCTGACCAGGACCC | GCCTGGGCGGGACTTCATGG | 93.8 | 220 |
tnfaip3 (a20) | XM_021576327 | CTTCAAGTTCTGCGTTTGTACACA | CTTGACCGCTTTCAGCAGGTTA | 98.4 | 139 |
usp4 | XM_021609985 | GACGAGTGGTTTCTGATTGATAG | TTGTCAACAGGGCCGGGATAG | 101.0 | 119 |
serping1 (c1inh) | NM_001124379 | AAGGAATGACGAACGGCAAACG | TCAGCTGTCTCACAGTAGTACAT | 100.9 | 169 |
c4bp | XM_021564396 | GAAGTGATGAACGGCCGATATAA | ACCACTTCACATACAGGAACTCT | 99.6 | 152 |
cfi | XM_021593383 | ACCCAGTGTTTGCAAGAGAACC | CAGTTGGCGATCAGAGAGACG | 101.1 | 167 |
cfh | XR_002473365 | GCTGGACCAAGACACTTGGC | CACCAACCCCCGGTAGAGG | 102.1 | 166 |
cd59 | XM_021606996 | GATTGAGTGGGCAAAGTATTGTAT | AGCAATGTTATGTAACAGGGTATG | 98.1 | 167 |
a2m | XM_021582312 | GGGAGGAAGGATGAGATGAGTA | GGTCCTGAAGCTCCACTGTTAG | 101.1 | 184 |
nfkbia-1 | NM_001124368 | AACCCTGGAGGAAAACAGTGAC | CGCCGTCTGTCTCTGATTGTTC | 100.6 | 153 |
nfkbia-2 | XM_021574049 | TGAAGTTGTCGCCAGTGAGCTC | GGCTCATTGCAGGACAGCTCT | 105.0 | 187 |
nfkbia-3 | XM_021600117 | AGAGTGGCCAATGTCGAAGTCT | TTGTGCGTCCAGTAACATATTATC | 97.1 | 175 |
il1b | NM_001124347 | GAGAGTGCTGTGGAAGAACATAT | GCAGCTCCATAGCCTCATTCAT | 100.0 | 157 |
cxcl8 (all variants) | AJ279069 | CTGAGGGGATGAGTCTGAGAG | ATCTCCTGACCGCTCTTGCTC | 105.1 | 169 |
il4/13-1 | NM_001246341 | CTGTCAGAGGAACTTCTGGAAAC | TCACCAAACGCGTCATTTTTCAC | 101.7 | 131 |
tgfb-1 | XM_021591332 | ATCAGGGATGAACAAGCTGAGG | TTCGCACACAGCAACTCTCCG | 72.0 | 161 |
tgfb-2 | XM_021563342 | CATTCCAAGGTGCTAGGTCTGT | TCTTGGGGGTCTTGCCGATGT | 99.9 | 121 |
socs1 | NM_001146166 | ACGGATTCTGCGTCGGAAAATAT | ACACAGTTCCCTGGCATCCGT | 104.4 | 92 |
sod2 | XR_002474449 | TCCCTGACCTGACCTACGAC | GGCCTCCTCCATTAAACCTC | 100.1 | 201 |
gpr84 | XM_021609929 | AACTGAGGATGCTGGAGAACGT | GCACGCCGAAGTAGCGGTAG | 100.0 | 96 |