TABLE 5.
HCG | HRGIZ | HGM-P | |||||||||
Clone | MLST Oxford ST/CC | No. isolates n = 202 | Selected isolates n = 31 | Clone | MLST Oxford ST/CC | No. isolates n = 42 | Selected isolates n = 31 | Clone | MLST Oxford ST/CC | No. isolates n = 8 | Selected isolates n = 7 |
A | 33 | 4 | 1 | 369/92 | 18 | 12 | I | 1 | 1 | ||
B | 37 | 4 | 2 | 1 | 1 | II | 5 | 4 | |||
C | 31 | 1 | 3 | 1 | 1 | III | 1 | 1 | |||
D | 7 | 1 | 4 | 1 | 1 | IVΔ | 1054/636 | 1 | 1 | ||
E | 12 | 1 | 5φ | 208/92 | 2 | 2 | |||||
F | 4 | 1 | 6 | 1 | 1 | ||||||
Gφ | 136/92 | 41 | 9 | 7 | 1 | 1 | |||||
HΔ | 758/636 | 16 | 1 | 8 | 1 | 1 | |||||
I | 9 | 1 | 9 | 12 | 8 | ||||||
J | 4 | 1 | 10 | 1 | 1 | ||||||
K | 2 | 1 | 11 | 1 | 1 | ||||||
L | 2 | 1 | 12 | 1 | 1 | ||||||
M | 1 | 1 | Nt∗ | 1 | |||||||
N | 1 | 1 | |||||||||
O | 1 | 1 | |||||||||
P | 1 | 1 | |||||||||
Q | 1 | 1 |
Nt: Non-typeable isolate. ∗, φ, Δ, isolates belonging to the same clone. ST, sequence type; CC, clonal complex.