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. 2019 Sep 30;14(9):e0222902. doi: 10.1371/journal.pone.0222902

Table 2. Summary of the placement and parameterization of the AGBNP2 enclosed hydration spheres for the dopamine D3 receptor binding site.

Locationa HSA site Idb AGBNP2 site Idb AGBNP2 anchoring type c psd (EEbulk)e (EEbulk)×ps f
OBS 0 0,1 Asp 110 backbone carbonyl 1.00 2.36 2.36
OBS 3,4,8,21 3,4,5 Asp 110 side chain carboxylate 0.86 3.28 2.83
OBS 25,26 9 Center of mass 0.66 1.92 1.27
OBS 14,19,41 12 Center of mass 0.57 5.32 3.05
OBS 1 13 Center of mass 0.87 2.80 2.44
OBS/SBS boundary 11 10 Center of mass 0.83 2.32 1.92
OBS/SBS boundary 9 18 Ser 182 hydroxyl hydrogen 0.87 0.21 0.19
SBS 12 11 Center of mass 0.63 0.92 0.58
SBS 34,42 14 Center of mass 0.58 1.31 0.77
SBS 5 15 Center of mass 0.95 0.34 0.33
SBS 15 16 Center of mass 0.68 0.50 0.34
SBS 37 17 Center of mass 0.34 0.08 0.03

aOBS: Orthosteric binding site; SBS: Secondary binding site.

bSte Id as shown in Fig 3

cSee reference.

dAverage water occupancy of the site measured by HSA

eAverage energy of the site relative to bulk measured by HSA, Ebulk = −12.24 kcal/mol.

fOverall energy score of the HSA sites indicated in column 2 and of the enclosed hydration score of the AGBNP2 hydration spheres indicated in column 3 in kcal/mol.