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. 2019 Sep 30;10:4283. doi: 10.1038/s41467-019-12072-1

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — Comparative phylogenomic analysis of L. monocytogenes. A phylogenomic tree based on the comparative analysis of the core genes derived from the closed genomes of 144 L. monocytogenes strains together with XYSN, 15LG, and 16E. The maximum likelihood phylogeny was inferred using RAxML (with 100 bootstrap values) based on the concatenated core gene sequence (n = 1977 CDS, 1.69 Mb). L. monocytogenes XYSN, 15LG, and 16E formed a separate highly supported clade (100). Representative serotypes within the lineages are shown in parentheses