Skip to main content
. 2019 Sep 3;8(9):371. doi: 10.3390/antiox8090371

Table 3.

The interaction of docking the isolated compounds (1–4) with key amino acid residues in the binding sites of 4 MAPKs (P38 α, ERK2, JNK& MK3), in comparison to the co-crystallized ligand.

Compound P38 α MAPK ERK1/2 JNK1 MK3
FlexX Score Amino Acids Interactions Hyde Assessment/Predicted Ki FlexX Score Amino Acids Interactions Hyde Assessment/Predicted Ki FlexX Score Amino Acids Interactions Hyde Assessment/Predicted Ki FlexX Score Amino Acids Interactions Hyde Assessment/Predicted Ki
Curcumin −24.639 Gly110, Gly033 Met109, Thr106, Asp 168, Asn155, His107 −34/µM −21.8 MET 108, Gln105, Glu33, Thr 110, Lys114 −28 /µM −17.72 Asn 114, Met111, Lys 55, Ile32 −23 /µM −24.63 Lys73, Met121, Glu119, Glu125 −36/ nM
Physcion −27.99 Gly110, Met109, Thr106, Ala 111, His107 −33/µM −22.6 Met 108, Gln 105, Lys 54 −23/ µM −24.07 Glu 109, Met111, Ile32 −32 /µM −27.99 Met121, Glu119, Thr186 −24/ µM
Chrysophanol −27.65 Gly110, Met109, Thr106, Ala 111, His107 −32/µM −22.5 Gln 105, Asp 106, Met 108, Lys54, Asp167, Tyr36, Gly34, Ile56 −17/ mM −24.44 Glu 109, Met111, Ile32, Ala53 −30 /µM −27.65 Met121, Glu119, leu50, leu173 −35 /µM
Hesperidin −20.03 Gly110, Met109, Thr106, Asp 168, Ser 154 −38/nM −21.9 Asp 106, Met108, Lys114, Asp111, Tyr36, Glu33, Asn15, Gln105, Ile31 −14/ mM −13.12 Glu 109, Met111, Ile32, Ser34, Lys55 −24/ µM −20.03 Glu125, Cys120, Met121, Asp187, Glu 170, Lys 73 −22/ µM
(Co-crystallized ligand) −30.7 Gly110, Met109 Thr106, Ala 157 −41/nM −39 Lys 54, Asp 167, Met 108, Thr 110, Tyr-36, Gly34, Ile56 −45/ nM −29 Ile 32, Met111, Glu 109, Val158, Leu168, Ala53, Val40 −39/ nM −43.17 Met121, Cys120, Glu 170, Glu 125, leu52 −18 /mM