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. 2019 Sep 4;20(18):4328. doi: 10.3390/ijms20184328

Table 3.

Comparison of the computed heme-tilt angle from AA MD simulations of CYP 2C9 and CYP 2C19 with previously reported values. The heme-tilt angle is the angle between the heme plane and the membrane normal (see Materials and Methods and Figure 2).

Source Reference Lipid/Force Field Protein PDB ID Heme-Tilt Angle (°)
CYP 2C9
MD Simulation Current Study POPC/LIPID14 1R9O 40–43 ± 5
[22] POPC/GAFF lipid 1R9O (1) 44 ± 4
1R9O (2) 41 ± 4
[40] DOPC/Berger 1OG2 55 ± 5
[41] DOPC/Berger 1OG2 61 ± 4
OPM Database [43] DOPC/OPM 1R9O 59.8
1OG5 71.9
CYP 2C19
MD Simulation Current Study POPC/LIPID14 4GQS 55–61 ± 5
OPM Database [43] DOPC/OPM 4GQS 74.0