Table 3.

Statistics of alternative splicing (AS) events for embryonic days 16 and 19 bursal cells from Hy-Line W-36 embryos.

Event type	NumEvents.JC.only	SigEvents.JC.only	NumEvents.JC+readsOnTarget	SigEvents.JC+readsOnTarget
SE	17,836	300 (91:209)	17,848	322 (98:224)
MXE	2,802	852 (494:358)	2,803	854 (489:365)
A5SS	6	0 (0:0)	6	0 (0:0)
A3SS	17	1 (0:1)	17	1 (0:1)
RI	12	0 (0:0)	12	0 (0:0)

(1) event_type: AS event types (SE, MXE, A5SS, A3SS, RI).

(2) NumEvents.JC.only: the total number of AS events, with only reads span splicing junctions taken into account.

(3) SigEvents.JC.only: the total number of differential AS events, with only reads span splicing junctions taken into account(up:down).

(4) NumEvents.JC+readsOnTarget: the total number of AS events, with both reads span splicing junctions and reads on target exons taken into account.

(5) SigEvents.JC+readsOnTarget: the total number of differential AS events, with both reads span splicing junctions and reads on target exons taken into account.