Extended Data Table 1.
Cryo-EM data collection, refinement and validation statistics
NLRP3-NEK7 Talos Arctica dataset | NLRP3-NEK7 Titan Krios dataset | |
---|---|---|
Data collection and processing | ||
Magnification | 105,000 | 165,000 |
Voltage (keV) | 200 | 300 |
Electron exposure (e−/Å2) | ~59 | ~55 |
Defocus range (μm) | −0.5 to −3.0 | −0.8 to −3.0 |
Super Resolution pixel size (Å) | 0.589 | 0.42 |
Symmetry imposed | C1 | C1 |
Initial particle images (no.) | 1,086,055 | 1,850,332 |
Final particle images (no.) | 98,340 | 108,771 |
Map resolution (Å) | 4.3 | 3.8 |
FSC threshold | 0.143 | 0.143 |
Map resolution range (Å) | 3.5–5.8 | 2.5–6.6 |
Refinement | ||
Initial model used | ||
Model resolution (Å) | 4.3 | |
FSC threshold | 0.5 | |
Model resolution range (Å) | 2.5–6.6 | |
Map sharpening B factor (Å2) | −100 | |
Model composition | ||
Non-hydrogen atoms | 7979 | |
Protein residues | 980 | |
Ligands | 1 | |
B factors (Å2) | ||
Protein | 132.7 | |
Ligand | 96.7 | |
R.m.s. deviations | ||
Bond lengths (Å) | 0.006 | |
Bond angles (°) | 1.345 | |
Validation | ||
MolProbity score | 2.35 | |
Clashscore | 8.92 | |
Poor rotamers (%) | 1.91 | |
Ramachandran plot | ||
Favoured (%) | 84.96 | |
Allowed (%) | 14.02 | |
Disallowed (%) | 1.02 |