TABLE 1.
Primer | Sequencea | Amplicon size (bp) |
Efficiency |
---|---|---|---|
Dros_rt_1 (Drosophila
actin gene [51]) |
F: 5′-GGAAACCACGCAAATTCTCAGT-3′ | 140 | 1.96 |
R: 5′-CGACAACCAGAGCAGCAACTT-3′ | |||
Universal bacterial primer (52) |
F: 5′-ACTCCTACGGGAGGCAGCAGT-3′ | 172 | 1.85 |
R: 5′-ATTACCGCGGCTGCTGGC-3′ | |||
Acetobacter spp. (51) | F: 5′-TAGTGGCGGACGGGTGAGTA-3′ | 134 | 1.96 |
R: 5′-AATCAAACGCAGGCTCCTCC-3′ | |||
Lactobacillus spp. (51) | F: 5′-AGGTAACGGCTCACCATGGC-3′ | 108 | 1.98 |
R: 5′-ATTCCCTACTGCTGCCTCCC-3′ | |||
RpLP0 (29) | F: 5′-CCGAAAAGTCTGTGCTTTGTTCT-3′ | 83 | 1.85 |
R: 5′-CGCTGCCTTGTTCTCCCTAA-3′ | |||
Duox (this study) | F: 5′-CATGCGCTCCTTCCACAATG-3′ | 146 | 1.82 |
R: 5′-CACCAAGAAGAAACAGCCGC-3′ | |||
p38c (30) | F: 5′-TACCTATCGCGAGATCCGTCT-3′ | 225 | 1.84 |
R: 5′-ATGTACTTCAGTCCCCGCAGT-3′ | |||
Mkp3 (20) | F: 5′-GTGACGCTCGCCTACTTGAT-3′ | 102 | 1.82 |
R: 5′-GAAGTGGAAGTTGGGCGATA-3′ | |||
Cad99C (21) | F: 5′-TCTTCGTGAAGCCAGTGGAC-3′ | ||
R: 5′-ACGATAGCGGGTTACCGTGC-3′ | 123 | 1.84 |
F, forward; R, reverse.