Table 1.
Differentially expressed genes involved in brassinosteroid biosynthesis and cell elongation.
| Gene ID | Symbol | Log2FC | q-value |
|---|---|---|---|
| Brassinosteroid biosynthesis | |||
| AT3G13730 | Cytochrome P450, family 90, subfamily D, polypeptide 1 (CYP90D1) | 1.02 | 0.000000 |
| AT3G30180 | Brassinosteroid-6-oxidase 2 (BR6OX2) | 1.66 | 0.000000 |
| AT5G14400 | Cytochrome P450, family 724, subfamily A, polypeptide 1 (CYP724A1) | −4.58 | 0.000431 |
| AT1G73340 | Abietane diterpene oxidase 1 (ADTO1) | −1.01 | 0.000023 |
| Cell elongation/expansion | |||
| AT5G39860 | Paclobutrazol resistance1 (PRE1) | −1.30 | 0.000000 |
| AT3G15540 | Indole-3-acetic acid inducible 19 (IAA19) | −1.61 | 0.000000 |
| AT1G52830 | Indole-3-acetic acid inducible 6 (IAA6) | −1.55 | 0.000001 |
| AT1G15050 | Indole-3-acetic acid inducible 34 (IAA34) | −1.95 | 0.000000 |
| AT2G01200 | Indole-3-acetic acid inducible 32 (IAA32) | −1.04 | 0.000000 |
| AT4G34790 | Small auxin upregulated RNA 3 (SAUR3) | −1.42 | 0.000000 |
| AT2G21200 | Small auxin upregulated RNA 7 (SAUR7) | −1.13 | 0.000005 |
| AT4G36110 | Small auxin upregulated RNA 9 (SAUR9) | −1.46 | 0.000000 |
| AT4G38825 | Small auxin upregulated RNA 13 (SAUR13) | −1.81 | 0.000000 |
| AT5G18010 | Small auxin upregulated RNA 19 (SAUR19) | −1.62 | 0.000000 |
| AT5G18020 | Small auxin upregulated RNA 20 (SAUR20) | −1.23 | 0.000000 |
| AT5G18030 | Small auxin upregulated RNA 21 (SAUR21) | −1.07 | 0.000000 |
| AT5G18050 | Small auxin upregulated RNA 22 (SAUR22) | −1.84 | 0.000000 |
| AT5G18060 | Small auxin upregulated RNA 23 (SAUR23) | −1.30 | 0.000000 |
| AT5G18080 | Small auxin upregulated RNA 24 (SAUR24) | −1.25 | 0.000000 |
| AT4G13790 | Small auxin upregulated RNA 25 (SAUR25) | −2.36 | 0.000000 |
| AT3G03820 | Small auxin upregulated RNA 29 (SAUR29) | −1.40 | 0.000000 |
| AT4G22620 | Small auxin upregulated RNA 34 (SAUR34) | −1.34 | 0.000321 |
| AT2G28085 | Small auxin upregulated RNA 42 (SAUR42) | −2.11 | 0.000254 |
| AT1G79130 | Small auxin upregulated RNA 40 (SAUR40) | −1.65 | 0.000061 |
| AT1G29430 | Small auxin upregulated RNA 62 (SAUR62) | −1.38 | 0.000000 |
| AT1G29440 | Small auxin upregulated RNA 63 (SAUR63) | −1.29 | 0.000000 |
| AT1G29460 | Small auxin upregulated RNA 65 (SAUR65) | −1.34 | 0.000000 |
| AT5G20820 | Small auxin upregulated RNA 76 (SAUR76) | −1.06 | 0.000000 |
| AT4G13390 | Extensin 12 (EXT12) | 1.01 | 0.000000 |
| AT1G21310 | Extensin (EXT3) | −1.48 | 0.000000 |
| AT2G43150 | Proline-rich extensin-like family protein | −1.74 | 0.000000 |
| AT3G28550 | Proline-rich extensin-like family protein | −1.34 | 0.000000 |
| AT3G24480 | Proline-rich extensin-like family protein | −1.24 | 0.000000 |
| AT1G65310 | Xyloglucan endotransglucosylase/hydrolase 17 (XTH17) | −1.17 | 0.000000 |
| AT3G23730 | Xyloglucan endotransglucosylase/hydrolase 16 (XTH16) | −1.01 | 0.000000 |
| AT4G25810 | Xyloglucan endotransglycosylase 6 (XTR6) | 1.04 | 0.000000 |
| AT4G28850 | Xyloglucan endotransglucosylase/hydrolase 26 (XTH26) | 1.19 | 0.000000 |
| AT3G48580 | Xyloglucan endotransglucosylase/hydrolase 11 (XTH11) | 1.47 | 0.000000 |
| AT1G70720 | Plant invertase/pectin methylesterase inhibitor superfamily protein | −2.52 | 0.000000 |
| AT2G45220 | Pectin methylesterase 17 (ATPME17) | −2.05 | 0.000000 |
| AT3G26610 | Polygalacturonase involved in expansion 1 (PGX1) | −1.17 | 0.000000 |
| AT5G55590 | Quartet1 (QRT1) | 2.38 | 0.000000 |
| AT2G21610 | Pectinesterase 11 (PE11) | 1.67 | 0.000290 |
| AT5G20860 | Plant invertase/pectin methylesterase inhibitor superfamily | 2.18 | 0.000000 |
| AT3G12880 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 2.55 | 0.000003 |
| AT2G14900 | Gibberellin-regulated family protein | −1.07 | 0.000000 |
| AT5G14920 | GA-stimulated in Arabidopsis 14 (GASA14) | −1.06 | 0.000000 |
| AT1G22690 | Gibberellin-regulated family protein | 1.40 | 0.000000 |
| AT4G23560 | Glycosyl hydrolase 9B15 (GH9B15) | −2.82 | 0.000089 |
| AT4G02290 | Glycosyl hydrolase 9B13 (GH9B13) | −1.16 | 0.000000 |
| AT2G32990 | Glycosyl hydrolase 9B8 (GH9B8) | 1.37 | 0.000000 |
| AT1G24070 | Cellulose synthase-like A10 (CSLA10) | −1.47 | 0.000003 |
| AT4G24000 | Cellulose synthase-like G2 (CSLG2) | 1.73 | 0.000000 |
| AT4G38080 | Hydroxyproline-rich glycoprotein family protein | 2.50 | 0.000000 |
| AT2G36970 | UDP-glycosyltransferase superfamily protein | 1.61 | 0.000000 |
Differentially expressed genes were defined by two-fold change difference between melatonin and dimethyl sulfoxide treatment with q-value ≤ 0.001 (Storey and Tibshirani, 2003).