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. 2019 Jul 22;11(10):2727–2740. doi: 10.1093/gbe/evz155

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© The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 5. — —(A) A maximum-likelihood tree for the Apicomplexa inferred by IQ-TREE using the site-heterogeneous LG+PMSF(C60)+F+G4 model on 35 plastid-encoded genes (6,403 amino acid sites). Branch support values are 100% SH-aLRT, 100% UFBoot2+NNI, 100% SBS, and 1.0 PP unless annotated. (B) Progressive removal of the fastest evolving sites in increments of 5% and variation of SBS, SH-aLRT, and UFBoot2+NNI branch support values under the site-heterogeneous LG+PMSF(C60)+F+G4 model for the branch that united the Hematozoa and the Coccidia.