Table 2.
Imputation INFO scores in the UK Biobank. Mean and standard deviation across all four batches shown. See Supplemental Table S7 for details on each batch
Locus | Minimac3 INFO score across batches | Risk variant frequency across batches | ||
---|---|---|---|---|
Mean | St. dev. | Mean | St. dev. | |
DRD4 VNTR | 0.9059 | 0.0010 | 0.2113 | 0.0010 |
MAOA VNTR | 0.9680 | 0.0003 | 0.6391 | 0.0015 |
SLC6A3 VNTR | 0.9254 | 0.0004 | 0.2533 | 0.0010 |
SLC6A4 5HTTLPR | 0.8831 | 0.0014 | 0.5630 | 0.0008 |
SLC6A4 rs25531 | 0.9071 | 0.0022 | 0.9255 | 0.0006 |