Table 2.

Phenotype/genotype description of the 14 TGCT patients with gr/gr deletion and of the 5 TGCT patients with other partial AZFc deletions

Patient	Origin	Testis tumor histology	Total sperm count (106)	Y chromosome clade/haplogroups cluster	PCR plus/minus		CDY1/DAZ dosage		RFLP
					sY1191	sY1291	CDY1 copy number	DAZ copy number	CDY1 deleted copy	DAZ deleted copy
gr/gr deletion
A818	Italian	Non-seminoma	0.00	J	Present	Absent	1	2	CDY1A	DAZ3/4
A1171	Italian	Seminoma	720.00	P*QR	Present	Absent	1	2	CDY1A	DAZ1/2
A1445	Italian	Seminoma	244.80	P*QR	Present	Absent	1	2	CDY1A	DAZ3/4
A1663	Italian	Non-seminoma	7.56	CFGHI	Present	Absent	3	6	CDY1B	DAZ1/2
A1713	Italian	Seminoma	109.20	P*QR	Present	Absent	1	2	CDY1A	DAZ3/4
A1734	Italian	Seminoma	0.36	CFGHI	Present	Absent	1	2	CDY1A	DAZ3/4
A1912	Italian	Seminoma	209.00	E	Present	Absent	1	2	CDY1B	DAZ3/4
A2140	Italian	Seminoma	240.00	P*QR	Present	Absent	1	2	CDY1B	DAZ1/2
KG8	Italian	Non-seminoma	152.00	KLO	Present	Absent	1	2	CDY1A	DAZ3/4
KG62	Italian	Seminoma	56.00	KLO	Present	Absent	1	2	CDY1A	DAZ1/2
KG162	Italian	Seminoma	35.00	J	Present	Absent	1	2	CDY1A	DAZ1/2
16–001	Spanish	Seminoma	98.70	E	Present	Absent	1	2	CDY1A	DAZ3/4
17–484	Spanish	Seminoma	89.60	J	Present	Absent	1	2	CDY1A	DAZ3/4
17–733	Spanish	Seminoma	0.00	P*QR	Present	Absent	1	2	CDY1A	DAZ1/2
Other partial AZFc deletions:
b2/b3 deletion
A1881	Italian	Seminoma	36.00	CFGHI	Absent	Present	2	4	CDY1A	DAZ3/4
KG117	Italian	Seminoma	38.40	E	Absent	Present	1	2	CDY1B	DAZ3/4
KG34	Italian	Seminoma	135.00	CFGHI	Absent	Present	1	2	CDY1A	DAZ3/4
b1/b3 deletion
KG156	Italian	Seminoma	40.00	CFGHI	Absent	Absent	2	4	No deletion	DAZ1/2
Atypical deletion
A1623	Italian	Non-seminoma	45.51	J	Present	Present	1	4	CDY1B	No deletion