KEY RESOURCES TABLE
REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Mouse anti-Nestin | Abcam | ab22035 |
Rat anti-CTIP2 | Abcam | ab18465 |
Rabbit anti-SATB2 | Abcam | ab34735 |
Chicken anti-MAP2 | Abcam | ab5392 |
Rabbit anti-Ki67 | Abcam | ab15580 |
Rabbit anti-TBR1 | Abcam | ab31940 |
Rabbit anti-TBR2 | Abcam | ab23345 |
Rabbit anti-beta-catenin | Abcam | E247 |
Mouse anti-GABA | Abcam | ab86186 |
Mouse anti-GABA B Receptor 1 | Abcam | ab55051 |
Rabbit anti-Calretinin | Abcam | ab92341 |
Rabbit anti-TTF1 (NKX2.1) | Abcam | ab76013 |
Rabbit anti-Synapsin1 | Millipore | AB1543P |
Mouse anti-NeuN | Millipore | MAB377 |
Mouse anti-Parvalbumin | Millipore | MAB1572 |
Rat anti-Somatostatin | Millipore | MAB354 |
Rabbit anti-SOX2 | Cell Signaling | 2748 |
Rabbit anti-GFAP | DAKO | Z033429 |
Donkey anti-Mouse IgG- Alexa Fluor 488 | Thermo Fisher | R37114 |
Donkey anti-Rabbit IgG- Alexa Fluor 488 | Thermo Fisher | R37118 |
Donkey anti-Rat IgG- Alexa Fluor 488 | Thermo Fisher | A21208 |
Goat anti-Mouse IgM- Alexa Fluor 488 | Thermo Fisher | A21042 |
Goat anti-Chicken IgY- Alexa Fluor 488 | Thermo Fisher | A11039 |
Donkey anti-Rabbit IgG- Alexa Fluor 555 | Thermo Fisher | A31572 |
Donkey anti-Mouse IgG- Alexa Fluor 555 | Thermo Fisher | A31570 |
Donkey anti-Mouse IgG- Alexa Fluor 647 | Thermo Fisher | A31571 |
Donkey anti-Rabbit IgG- Alexa Fluor 647 | Thermo Fisher | A31573 |
Goat anti-Mouse IgM- Alexa Fluor 647 | Thermo Fisher | A21238 |
Goat anti-Chicken IgY- Alexa Fluor 647 | Thermo Fisher | A21449 |
Chemicals, Peptides, and Recombinant Proteins | ||
Dorsomorphin | R&D Systems | 3093 |
Stemolecule SB431542 | StemGent | 04-0010-10 |
ROCK inhibitor (Ri) Y-27632 dihydrochloride | Sigma-Aldrich | 688000 |
FGF-Basic (AA 1-155) Recombinant Human Protein | Life Technologies | PHG0263 |
Animal-Free Recombinant Human EGF | Peprotech | AF-100-15 |
Recombinant Human BDNF | Peprotech | 450-02 |
Recombinant Human GDNF | Peprotech | 450-10 |
Recombinant Human NT-3 | Peprotech | 450-03 |
L-Ascorbic acid | Sigma-Aldrich | A4403 |
N6,2′-O-Dibutyryladenosine 3′,5′-cyclic monophosphate sodium salt | Sigma-Aldrich | D0627 |
Bicuculline methiodide | Tocris | 2503 |
Picrotoxin | Tocris | 1128 |
Muscimol | Tocris | 0289/1 |
CNQX disodium salt | Tocris | 1045 |
D-AP5 | Tocris | 0106 |
(R)-Baclofen | Tocris | 0796/10 |
Tetrodotoxin citrate | Tocris | 1069 |
Critical Commercial Assays | ||
Chromium Single Cell 3’ v2 Library kit | 10X Genomics | PN-120237 |
MyOne Silane Beads | Thermo Fisher | 37002D |
SPRIselect Reagent Kit | Beckman Coulter | B23317 |
Qubit dsDNA HS Assay Kit | Thermo Fisher | Q32854 |
Deposited Data | ||
Single-cell RNA sequencing data | This paper | NCBI GEO: GSE130238 |
Experimental Models: Cell Lines | ||
Control iPSCs | N/A | N/A |
Experimental Models: Organisms/Strains | ||
C57 black 6 | The Jackson Laboratory | C57BL6 |
Software and Algorithms | ||
GraphPad Prism | GraphPad Software | N/A |
AxIS Software | Axion Biosystems | N/A |
Neural Metrics Tool | Axion Biosystems | N/A |
MATLAB | MathWorks | N/A |
Cell Ranger software version 2.1.1 | 10X Genomics | N/A |