Table 1.
Pyrenophora tritici-repentis race 1 isolate genome information and assembly statistics
| V1 | M4a | Pt-1C-BFPa | |
|---|---|---|---|
| Isolate information | |||
| Sequencing Platform | PacBio Sequel | PacBio RSII | Sanger, Illumina |
| Genome accession | SAXQ00000000 | NQIK00000000 | AAXI00000000 |
| Collection site | Victoria, Australia | Western Australia, Australia | South Dakota, USA |
| Collection year | 2015 | 2009 | 1994 |
| Contig assembly statistics | |||
| Total length (Mb) | 40.4 | 40.9 | 38.0 |
| Number | 33 | 51 | 48 |
| N50 (Mb) | 3.4 | 2.9 | 1.9 |
| Mean (Kb) | 1224 | 802 | 778 |
| Max (Mb) | 9.6 | 5.6 | 6.7 |
| GC % | 50.4 | 50.7 | 50.8 |
| Gene predictions | |||
| Number | 14,050 | 13,797 | 12,171 |
| %bBUSCO gene | 96.55 | 98.62 | 98.62 |
aPreviously published genome assemblies
bComplete and fragmented gene