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. 2019 Aug 28;9(10):3079–3085. doi: 10.1534/g3.119.400392

Table 4. Repetitive content of the newly sequenced G. turneri and G. raimondii genomes, and the previously published G. raimondii (Paterson et al. 2012). No LINE or SINE elements were detected. The genome size of G. turneri is 910 Mb and G. raimondii is 880 Mb.

G. turneri G. raimondii G. raimondii (Paterson et al. 2012)
Family Fragments Copies Total (Mb) Fragments Copies Total (Mb) Fragments Copies Total (Mb)
DNA 20,199 12,453 18.28 22,503 13,764 20.63 23,474 13,969 20.27
CMC/EnSpm 2 1 0.00 2 2 0.00 14 9 0.00
EnSpm/CACTA 2,443 1,385 3.92 3,172 1,864 5.24 3,648 1,878 4.87
Harbinger 30 22 0.01 58 41 0.03 42 28 0.02
hAT 2,725 1,712 1.01 3,079 1,895 1.01 3,209 1,966 1.03
L1 1,255 638 1.56 1,256 618 1.49 1,290 633 1.54
Mariner/Tc1 98 51 0.07 76 40 0.06 84 43 0.06
MuDR 13,590 8,592 11.71 14,828 9,280 12.79 15,145 9,381 12.73
MULE-MuDR 52 50 0.01 21 19 0.00 25 23 0.00
PIF-Harbinger 4 2 0.00 11 5 0.00 17 8 0.01
LTR 338,644 199,672 277.72 325,760 190,122 264.75 336,908 196,564 267.24
LTR 224 216 0.02 214 206 0.02 311 304 0.03
Copia 48,098 28,294 45.51 48,911 29,032 45.29 50,993 29,965 45.72
Gypsy 290,322 171,162 232.19 276,635 160,884 219.44 285,604 166,295 221.49
Total 358,843 212,125 296.00 348,263 203,886 285.38 360,382 210,533 287.51