TABLE 3.
Isolate | Genome size (bp) | % GC | No. of: |
GenBank accession no. | |||||
---|---|---|---|---|---|---|---|---|---|
Contigs | CDSa | rRNA | tRNA | Signal peptides | Repeat regions | ||||
Brachyspira aalborgi PC2022III | 2,609,344 | 28.3 | 15 | 2,368 | 3 | 36 | 132 | 1 | SAYK00000000 |
Brachyspira aalborgi PC2777IV | 2,655,229 | 28.1 | 30 | 2,449 | 3 | 36 | 142 | 2 | SAYJ00000000 |
Brachyspira aalborgi PC3053II | 2,667,320 | 28.2 | 34 | 2,465 | 3 | 36 | 136 | 1 | SAYI00000000 |
Brachyspira aalborgi PC3517II | 2,645,532 | 28.2 | 35 | 2,430 | 3 | 36 | 138 | 1 | SAYH00000000 |
Brachyspira aalborgi PC3714II | 2,743,156 | 28.1 | 24 | 2,512 | 3 | 36 | 132 | 1 | SAYG00000000 |
Brachyspira aalborgi PC390II | 2,660,153 | 28.1 | 32 | 2,479 | 3 | 35 | 132 | 1 | SAYF00000000 |
Brachyspira aalborgi PC3939II | 2,589,393 | 28.2 | 24 | 2,343 | 3 | 36 | 123 | 2 | SAYE00000000 |
Brachyspira aalborgi PC3997IV | 2,649,511 | 28.1 | 33 | 2,441 | 3 | 36 | 139 | 1 | SAYD00000000 |
Brachyspira aalborgi PC4226IV | 2,715,122 | 28.1 | 40 | 2,549 | 3 | 35 | 137 | 5 | SAYC00000000 |
Brachyspira aalborgi PC4580III | 2,591,031 | 28.3 | 10 | 2,361 | 3 | 37 | 129 | 1 | SAYB00000000 |
Brachyspira aalborgi PC4597II | 2,670,785 | 28.1 | 28 | 2,495 | 3 | 35 | 137 | 1 | SAYA00000000 |
Brachyspira aalborgi PC5099IV | 2,714,460 | 28.1 | 21 | 2,554 | 3 | 35 | 139 | 2 | SAXZ00000000 |
Brachyspira aalborgi PC5587-p | 2,665,010 | 28.1 | 33 | 2,479 | 3 | 35 | 132 | 1 | SAXW00000000 |
Brachyspira aalborgi PC5587-u | 2,662,929 | 28.1 | 32 | 2,483 | 3 | 35 | 133 | 1 | SAXV00000000 |
Brachyspira pilosicoli PC5538III-hc | 2,755,401 | 27.6 | 113 | 2,507 | 3 | 34 | 169 | 1 | SAXY00000000 |
Brachyspira aalborgi PC5538III-lc | 2,746,864 | 28.1 | 32 | 2,500 | 3 | 36 | 139 | 1 | SAXX00000000 |
Brachyspira aalborgi 513AT | 2,504,147 | 28.1 | 8 | 2,294 | 3 | 36 | 121 | 1 | SAXU00000000 |
Brachyspira aalborgi W1 | 2,666,344 | 28.2 | 15 | 2,413 | 3 | 35 | 128 | 1 | SAXT00000000 |
CDS, coding sequences.