Table 2.
cpDNA | Diversity sites | Neutrality test | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Species | N | L | Θwt (SD) | πt (SD) | N h | H d | D | H | D* | F* |
N. incisum | 86 | 1761 | 0.00158 (0.00057) | 0.00119 (0.00007) | 22 | 0.8569 | − 0.68752 | − 0.44444 | − 1.75001 | − 1.63040 |
N. franchetii | 90 | 1776 | 0.00100 (0.00040) | 0.00044 (0.00100) | 16 | 0.7803 | − 1.41216 | − 0.01131 | 0.58640 | − 0.11769 |
N. oviforme | 39 | 1778 | 0.00213 (0.00080) | 0.00171 (0.00025) | 17 | 0.9528 | − 0.63165 | − 0.02001 | 0.36015 | 0.04021 |
N. forrestii | 10 | 1778 | 0.00040 (0.00030) | 0.00040 (0.00018) | 3 | 0.5111 | ||||
mtDNA | Diversity sites | Neutrality test | ||||||||
Species | N | L | Θwt (SD) | πt (SD) | N h | H d | D | H | D* | F* |
N. incisum | 98 | 755 | 0.00103 (0.00056) | 0.00070 (0.00009) | 4 | 0.4841 | − 0.64264 | 0.26678 | − 2.66557 | − 2.36971 |
N. franchetii | 101 | 755 | 0.00026 (0.00026) | 0.00047 (0.00006) | 2 | 0.3552 | 0.96441 | 0.2505 | 0.49171 | 0.73856 |
N. oviforme | 56 | 755 | 0.00029 (0.00029) | 0.00066 (0.00003) | 2 | 0.4987 | 1.68499 | -0.16623 | 0.53364 | 1.00474 |
N. forrestii | 8 | 755 | 0 | 0 | 1 | 0 |
Nucleotide variation for N. incisum, N. franchetii, N. oviforme, and N. forrestii over cpDNA and mtDNA loci. D Tajima’s D, D* Fu and Li’s D*, F* Fu and Li’s F*, H Fay and Wu’s H, Hd haplotype diversity, L length, N number of samples, Nh number of haplotypes, θwt Watterson’s θ, πt total nucleotide diversity