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. 2018 Feb 21;20(4):1583–1589. doi: 10.1093/bib/bby011

Figure 1.

Figure 1

Standardized clustering purity of t-SNE k-means clustering results by using HVGs only. Table 1 contains the raw purity results. Standardized purity >0 indicates better than average (mean) performance. Purities from each data set are standardized separately. BASiCS was not used to analyze the Gierahn and Klein data sets because of the lack of spike-ins. scVEGs had an error with the Gierahn data set and called zero HVGs with the Yan and Deng data sets.