TABLE 1.
Primers used for PCR amplification.
| Primer | Primer sequence (5′–3′) | References |
| TEMF | TCGGGGAAATGTGCG | Velasova et al., 2019 |
| TEMR | TGCTTAATCAGTGAGGCACC | Velasova et al., 2019 |
| SHVF | GCCTTTATCGGCCTTCACTCAAG | Velasova et al., 2019 |
| SHVR | TTAGCGTTGCCAGTGCTCGATCA | Velasova et al., 2019 |
| PRE-F | GCTCCGATAATGAAAGCGT | Che et al., 2014 |
| PRE-R | TTCGGCTTGACTCGGCTGA | Che et al., 2014 |
| SME-F | GAGGAAGACTTTGATGGGAGGAT | Che et al., 2014 |
| SME-R | TCCCCTCAGGACCGCCAAG | Che et al., 2014 |
| CTX-M-1F | CAGAGATTTTGCCGTCTAAG | Xiao et al., 2019 |
| CTX-M-1R | GGCCCATGGTTAAAAAATCACTGC | Xiao et al., 2019 |
| CTX-M-2F | CTCAGAGCATTCGCCGCTCA | Xiao et al., 2019 |
| CTX-M-2R | CCGCCGCAGCCAGAATATCC | Xiao et al., 2019 |
| CTX-M-8F | ACTTCAGCCACACGGATTCA | Xiao et al., 2019 |
| CTX-M-8R | CGAGTACGTCACGACGACTT | Xiao et al., 2019 |
| CTX-M-9F | GTTACAGCCCTTCGGCGATGATTC | Xiao et al., 2019 |
| CTX-M-9R | GCGCATGGTGACAAAGAGAGTGCAA | Xiao et al., 2019 |
| CTX-M-25F | GCACGATGACATTCGGG | Xiao et al., 2019 |
| CTX-M-25R | AACCCACGATGTGGGTAGC | Xiao et al., 2019 |
| OXA-1-F | GGCACCAGATTCAACTTTCAAG | Che et al., 2014 |
| OXA-1-R | GACCCCAAGTTTCCTGTAAGTG | Che et al., 2014 |
| ADC-F | GGTATGGCTGTGGGTGTTATTC | This study |
| ADC-R | CTAAGACTTGGTCGAAAGGT | This study |
| KPC-F | CGTCTAGTTCTGCTGTCTTG | This study |
| KPC-R | CTTGTCATCCTTGTTAGGCG | This study |
| NDM-F | GGTTTGGCGATCTGGTTTTC | This study |
| NDM-R | CGGAATGGCTCACGATC | This study |
| IMP-F | GGAATAGAGTGGCTTAAYTCTC | This study |
| IMP-R | GGTTTAAYAAAACAACCACC | This study |
| VIM-F | GATGGTGTTTGGTCGCATA | This study |
| VIM-R | CGAATGCGCAGCACCAG | This study |
| VEB-F | GCGGTAATTTAACCAGA | This study |
| VEB-R | GCCTATGAGCCAGTGTT | This study |
| GES-F | GTTTTGCAATGTGCTCAACG | This study |
| GES-R | TGCCATAGCCAATAGGCGTAG | This study |
| DHA-F | AACTTTCACAGGTGTGCTGGGT | This study |
| DHA-R | CCGTACGCATACTGGCTTTGC | This study |
| EBC-F | TCGGTAAAGCCGATGTTGCGG | This study |
| EBC-R | CTTCCACTGCGGCTGCCAGTT | This study |
| ACC-F | AACAGCCTCAGCAGCCGGTTA | This study |
| ACC-R | TTCGCCGCAATCATCCCTAGC | This study |
| CIT-F | TGGCCAGAACTGACAGGCAAA | This study |
| CIT-R | TTTCTCCTGAACGTGGCTGGC | This study |
| chuA-F | GACGAACCAACGGTCAGGAT | Clermont et al., 2000 |
| chuA-R | TGCCGCCAGTACCAAAGACA | Clermont et al., 2000 |
| yhaA-F | TGAAGTGTCAGGAGACGCTG | Clermont et al., 2000 |
| yhaA-R | ATGGAGAATGCGTTCCTCAAC | Clermont et al., 2000 |
| TspE4.C2-F | GAGTAATGTCGGGGCATTCA | Clermont et al., 2000 |
| TspE4.C2-R | CGCGCCAACAAAGTATTACG | Clermont et al., 2000 |
| IS26-F | TTACATTTCAAAAACTCTGCTTACC | This study |
| ISEcp1-F | CAAAATGATCCCCTCGTCAAC | This study |
| IS903-R | GTTTAATGACCAGCACAGT | This study |
| ORF477-R | TCGTTTCGTGGTGCTGAATTT | This study |
| blc-R | TTTAGGTAACGCACGTTGGA | This study |
| sug-R | GGGCTGTTCTCCTGAATGAT | This study |
| ISAba1-F | TGGCACTTGCTTAATAAACGTGG | This study |
| tnpA-F | CATCACCGCGATAAAGCACC | This study |
| tnpA-R | GGCTCAAAGGCAATACGACC | This study |
| M9R-F | GAATTGCCTCCTAGTACGCTTAA | This study |
| M9R-R | CGGTTACGTAAGCTAGCTAGAAT | This study |