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. 2019 Jul 29;213(2):595–613. doi: 10.1534/genetics.119.302046

Table 2. Twenty-three QTL associated with flowering time detected in the BRIDG6 population.

QTLa LD groupb Maximum -log(p)c Location of most significant SNP (cM) Location of most significant SNP (bp) Number of significant SNPd Total number of SNP in QTL region (5 Mbp)e Max. Families segregatingf Min. Families Segregatingg
1_01 A 9.2 50.22 427,905,991 1 13 26 26
1_02 B 13.42 88.84 524,189,956 1 50 22 22
2_01 C 142.43 20.01 27,204,805 102 268 47 11
2_02 D 6.03 43.17 60,578,410 1 21 44 44
2_03 E 7.98 57.86 181,205,852 2 6 36 17
2_04 F 7.75 58.01 187,898,571 1 1 24 24
2_05 E 5.88 58.01 197,287,292 2 11 42 29
2_06 E 14.27 58.8 241,566,109 4 9 31 23
2_07 EG 10.36 58.8 257,828,128 2 4 37 13
2_08 EH 6.47 58.8 403,342,684 1 7 38 38
2_09 I 7.9 58.8 437,926,040 1 6 22 22
2_10 J 10.18 58.8 486,598,181 1 1 18 18
2_11 K 17.17 59.61 493,756,332 1 2 14 14
2_12 K 10.16 60.2 521,775,169 2 6 38 28
2_13 K 20.95 60.2 549,097,349 10 14 30 17
2_14 K 8.17 60.2 564,309,170 2 2 33 29
2_15 L 8.7 62.04 582,332,455 1 4 15 15
2_16 M 6.66 58.01 763,099,837 1 76 37 37
3_01 N 23.19 51.71 123,315,601 3 9 40 16
5_01 O 5.49 50.04 403,946,354 1 10 30 30
5_02 P 7.31 144.97 630,784,439 1 41 47 47
7_01 Q 32.44 34.85 39,192,808 41 197 41 13
7_02 R 44.56 131.1 646,266,549 2 99 42 13
a

Maximum–log(P-value) for any SNP in the QTL.

b

Flowering time QTL. Association determined by FDR threshold >.0.05.

c

QTL with the same letter include SNPs in high LD (r > 0.7)

d

Number of significant SNP in the QTL.

e

Total number of SNPs within 5 Mbp of QTL.

f

Maximum number of families for which a significant SNP in the QTL segregates.

g

Minimum number of families for which a significant SNP in the QTL segregates.