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| Transcription factor | NES | No. of targets | No. o Motifs/Tracks |
| Pax8 | 4.484 | 25 | 7 |
| Hsf1 | 4.04 | 11 | 1 |
| Pou5f1 | 3.916 | 27 | 2 |
| Ovol1 | 3.78 | 14 | 3 |
| Lef1 | 3.589 | 12 | 4 |
| Zic2 | 3.485 | 17 | 2 |
| Rfx2 | 3.464 | 6 | 3 |
| Egr1 | 3.433 | 14 | 3 |
| Gata2 | 3.422 | 12 | 1 |
| Gltpd1 | 3.287 | 11 | 2 |
| Hic1 | 3.224 | 11 | 3 |
| Zfat | 3.212 | 22 | 3 |
| Sod1 | 3.14 | 4 | 1 |
| Irf4 | 3.047 | 10 | 1 |
| Mtf1 | 3.034 | 11 | 2 |
NES: normalized enrichment score
